Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02183 ATGAGTAGGATAGAACTATCGAGGGCGAAGTCAGCGCCGGTTCCATTGGGGACTCTGATTGGTCGTGAGCTTCGAAATGGAAAAGTTGAAAAACCTTTTGTGAAGTATGGACAAGCTGGATTGGCCAAGAAAGGAGAAGATTACTTTCTGATCAAGACAGATTGCCTCAGGGTTCCCGGGGATGCATCAACGGCGTTTTCTGTCTTTGCGGTCTTTGATGGGCATAACGGTATATCAGCTGCTATTTTTGCGAAGGAAAACTTGCTAAGTAATGTTTTGAGTGCAATACCTCAAGATATTAGCAGGGATGCTTGGCTTCAGGCTCTTCCTCGTGCTCTGGTTGTTGGTTTTGTGAAGACTGACATAGAGTTTCAGCAAAAGGGGGAAACTTCTGGAACAACAGCTACATTTGTTTTGGTTGATGGATGGACTATCACTGTTGCATCTGTGGGAGATTCCCGCTGCATATTAGATACTCAGGGAGGTGTTGTTTCTCTTTTGACAGTTGATCACAGGCTGGAAGAGAATGCAGAAGAGAGGGAGCGCGTTACTGCCAGCGGTGGTGAAGTAGGAAGACTCAATGTATTTGGAGGCAATGAGGTTGGGCCTCTTCGCTGCTGGCCAGGTGGATTGTGCCTATCTAGATCTATAGGTGACACAGACGTGGGAGAATTTATTGTGCCAATACCACATGTTAAGCAAGTGAAGCTTTCAAATGCTGGTGGAAGGCTTATTATAGCTTCTGATGGTATTTGGGATGCTTTATCATCTGATATGGCTGCTAAGTCTTGTCGGGGTCTACCTGCAGAGCTTGCTGCAAAACTAGTGGTTAAGGAAGCTCTAAGGTCAAGAGGCCTCAAGGATGATACAACTTGCCTTGTTGTAGATATTATTCCTTCGGACCTCCCTGTATTACCACCAATTCCAAGAAAGAAACATAATATGCTAACTTCGCTTCTATTTTTTGGAAAGAAATCTGAGAACTCTATGAACAAAGCTACCAATAAGCTTTCTGCAGTTGGTGTTGTGGAGGAGTTATTTGAAGAGGGTTCTGCAATGCTTACAGAAAGGCTAGGTAAGGATTTCCCGCTTAACAAGAATTCTGGTATTTTCCGTTGTGCGGTTTGCCAAATGGACCAACCCCCTGGTGATGGTTTATCAATGAACTCTGGGCCTTTTTTCTCTCCTGCATCTAATCCATGGGAAGGCCCATTCCTCTGCACAAACTGTTGGAAGAAGAAGGATGCCATGGAAGGAAAAAAGCCTAGCAGACCCACCGTTACAGCATAA 1290 0.4481 MSRIELSRAKSAPVPLGTLIGRELRNGKVEKPFVKYGQAGLAKKGEDYFLIKTDCLRVPGDASTAFSVFAVFDGHNGISAAIFAKENLLSNVLSAIPQDISRDAWLQALPRALVVGFVKTDIEFQQKGETSGTTATFVLVDGWTITVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDLPVLPPIPRKKHNMLTSLLFFGKKSENSMNKATNKLSAVGVVEELFEEGSAMLTERLGKDFPLNKNSGIFRCAVCQMDQPPGDGLSMNSGPFFSPASNPWEGPFLCTNCWKKKDAMEGKKPSRPTVTA 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02183 429 Pfam Protein phosphatase 2C 63 280 IPR001932 -
Gma19g02183 429 CDD PP2Cc 43 297 IPR001932 -
Gma19g02183 429 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
Gma19g02183 429 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 428 - -
Gma19g02183 429 Gene3D - 33 301 IPR036457 -
Gma19g02183 429 SMART PP2C_SIG_2 50 297 IPR001932 -
Gma19g02183 429 SUPERFAMILY PP2C-like 38 297 IPR036457 -
Gma19g02183 429 SMART PP2C_4 23 295 IPR001932 -
Gma19g02183 429 PANTHER ALPHABET, ISOFORM E-RELATED 2 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02183 Gma-Chr19 50659616 50662981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02183 1 428 PP2C-type Phosphatase Gene Family AT1G09160 77.103 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02183 - - gmx:100807886 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02183 19 50659616 50662981 Gma19g02183 19 50659616 50662981 ECH
Gma19g02183 19 50659616 50662981 Gma03g02151 03 46958562 46960885 GST