Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02178 ATGGATCGGGAAGGAGGATCCAACGGCGGATCTTGCTACTACTCCGTTCTCGGGATTCGTAGGGACGCCTCCTTCTCTGATATTCGCACTGCCTACCGCAAACTCGCTATGaggtggcacccggacaagtgggctcagaatcctgcaaccgctggcgaagccaagcggcggtttcagcaaatccaagaagcctactcagTTCTCTCCGATCAGTCTAAAAGGTCAATGTACGATGCGGGGCTCTACGATCCTTTGGAGGAAGAAGACCAAGACTTTTGTGACTTCATGCAAGAGATGATCTCAATGATGAACAATGTGAAAGACGAGGGGGACAGTTTGGAGGACCTACAGAGGATGTTCGTGGAGATGGTGGGGGAAGATCATGGCCATGGGATCGGCTTTGACTTGAACCAGGATCAGACGGCTGGGAAGCGAGGACGCGTAAATGGATCAAAGGGCAACGCGCCCAAGCGCAGCAACTCCCGCAGTTAG 492 0.4309 MDREGGSNGGSCYYSVLGIRRDASFSDIRTAYRKLAMRWHPDKWAQNPATAGEAKRRFQQIQEAYSVLSDQSKRSMYDAGLYDPLEEEDQDFCDFMQEMISMMNNVKDEGDSLEDLQRMFVEMVGEDHGHGIGFDLNQDQTAGKRGRVNGSKGNAPKRSNSRS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02178 163 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Gma19g02178 163 MobiDBLite consensus disorder prediction 130 163 - -
Gma19g02178 163 PANTHER PUTATIVE, EXPRESSED-RELATED 9 149 - -
Gma19g02178 163 SMART dnaj_3 11 73 IPR001623 -
Gma19g02178 163 MobiDBLite consensus disorder prediction 142 163 - -
Gma19g02178 163 Gene3D DnaJ domain 2 103 IPR036869 -
Gma19g02178 163 PANTHER PUTATIVE, EXPRESSED-RELATED 9 149 - -
Gma19g02178 163 PRINTS DnaJ domain signature 14 32 IPR001623 -
Gma19g02178 163 PRINTS DnaJ domain signature 32 47 IPR001623 -
Gma19g02178 163 PRINTS DnaJ domain signature 53 73 IPR001623 -
Gma19g02178 163 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Gma19g02178 163 Pfam DnaJ domain 13 78 IPR001623 -
Gma19g02178 163 SUPERFAMILY Chaperone J-domain 12 85 IPR036869 -
Gma19g02178 163 CDD DnaJ 12 70 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02178 Gma-Chr19 50624004 50625471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02178 12 79 C2H2 Transcription Factor Family AT1G74250 43.478 9.66e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02178 - - gmx:548049 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02178 19 50624004 50625471 Gma19g02178 19 50624004 50625471 ECH