Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02177 ATGGCCACAACCATCCTTGAAATCTCAACTACTGTGTACACATACACAGATCCCCCTACAGCGCATGAAGGATGTGCATTTTCAGTCAAGTTCAATCCTAGCAATAGCTTCTGCCCAGCAATTCGTGAGGGTGATGAAAGGGGTGTTCAAATTCTTGTTCACGGCTCAAAACGGAGACGTGAAGATTCACAACAATCGGACACCTTCCGTATCGTTAGAAGTTTAAGGTCTCTGGTTCACTTAAAGAATGACATAGTGCCGTGCTTGGAAAATTTAGTTCAAAGATTGGTACGAGAGGAGTTGGAATGCCAACTTACAAGAACAATTAATAATCAGATTGGAATATCGGGAACCAAACCCTATCACCTGGTTTTTAAGAATGAATTGCCTGCTACAATTTATACTAACTCCAAGATCCAAGCTAAAGGCAACACTCCTCTCGAGGTTGCTCTTTTTGATATTGAATCTCAGTCTACAGTCACTGAGGGTTCACTGTCTTCGATCAAGATAGAGATATGTGTCCTTAATGGTGAGTTCGGTTCAAATGGCCTTGAAGATTGGAGTTCAGATCAATTTAACTCCAAAATCTTACCTCCAAGAGACAATAAAGGGCAGTTACTGAAAGGAGATACGATTATTACACTTGAAAATGGAGTTGGTTATATCACCAACCCTGAGATCACTGACAACTCAAGCTGGATAAGAACCCGACGCTTCAGGTTAGGAGCCAAGGTTGCACAATCAAATCTGAAAGATGCAATTAACATCAGGGAAGGTATAAGCAAACCTTTTATCGTCAAGGATGCCAGAGGAGAGAAGAAACACGACACTCCATCCCTCAATGATGAAACATGGCGTTTGAAACACATATCAAAAAGTGGTGAAGTTTGTCAGCGGCTGTCTAAGCACGGGATAAACACTGTTGAGGATCTGTTGAAGGAGCATGAAACCAATCCATCATCTTTGCCAGAGAAATTTGGCAAGATTTCAAAAAAGAAACTGGAACAAATTATTAAGCATGCTCAGAAAGCAAAGCATGACAAGACTTGTGTTGCTGAAGCCACATTTGAAGGACAAAATTATCATTCAGGGAAGAATATTCTCATCTCCGACGAGAGGGAGCATTACAAAAATTTGAAGGATCCGGTACCAATTGAGACAGTAACACATGAGTTAGTGAAAGCATTGACACCAGTTACAGCACAATACAGTGCTCCATATCAAGATGTGCAACAGCTTGACTTTCCAATTGAAGAAATTTCTAGACTAATGGACTCACTAAACTGGTCAGTAGAGGGGCAGTTTGTTGATGGAAACATATGGCCTGTTGCAATTGATGATCAAAATTTAAGTTGCTCTATGATTCCACCTGAAGCAGAATGTGATTGTGAGACGGACACGAAACGAAAGAAAACAAATGCTGTGGTTGTGGGAAATCTGCCTACTGCTTTCGACCGAAACACAAGCATTCTGAACGTTGATCCTGCAAAGGCTACTCCCAATGCTGACCTTTTTCTAATGCCAGAGCCTGATAGCCAGCTCGTGAGGGATAATAATTTTCATCAATTGGAACTGCCAGGAACTTTTCCTGGACAACCCATTCAATCCCTGAGAGATCTTGTTCGGCCGCATCATCGATCGTAA 1644 0.4161 MATTILEISTTVYTYTDPPTAHEGCAFSVKFNPSNSFCPAIREGDERGVQILVHGSKRRREDSQQSDTFRIVRSLRSLVHLKNDIVPCLENLVQRLVREELECQLTRTINNQIGISGTKPYHLVFKNELPATIYTNSKIQAKGNTPLEVALFDIESQSTVTEGSLSSIKIEICVLNGEFGSNGLEDWSSDQFNSKILPPRDNKGQLLKGDTIITLENGVGYITNPEITDNSSWIRTRRFRLGAKVAQSNLKDAINIREGISKPFIVKDARGEKKHDTPSLNDETWRLKHISKSGEVCQRLSKHGINTVEDLLKEHETNPSSLPEKFGKISKKKLEQIIKHAQKAKHDKTCVAEATFEGQNYHSGKNILISDEREHYKNLKDPVPIETVTHELVKALTPVTAQYSAPYQDVQQLDFPIEEISRLMDSLNWSVEGQFVDGNIWPVAIDDQNLSCSMIPPEAECDCETDTKRKKTNAVVVGNLPTAFDRNTSILNVDPAKATPNADLFLMPEPDSQLVRDNNFHQLELPGTFPGQPIQSLRDLVRPHHRS 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02177 547 Pfam Calmodulin binding protein-like N-terminal domain 121 268 IPR046831 -
Gma19g02177 547 MobiDBLite consensus disorder prediction 525 547 - -
Gma19g02177 547 Pfam Calmodulin binding protein central domain 279 343 IPR046830 -
Gma19g02177 547 PANTHER CALMODULIN-BINDING PROTEIN 57 440 - -
Gma19g02177 547 PANTHER OS02G0177800 PROTEIN 57 440 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02177 Gma-Chr19 50610289 50619988 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02177 85 351 Calmodulin-binding Proteins AT5G57580 37.011 2.68e-47 173
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02177 19 50610289 50619988 Gma03g02146 03 46917538 46923484 GST