Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02175 ATGGAGGGGATCCAACACCACTACGCTCGATCCTGCTCCTATCTACACGAGGTGAATGTGAAGAGCATGAACAACGACAACAAAATGTGGGTTGCGAGCACCACTACTCCCTCAGCTTTGTATTCCAATGAAGTAGCATATGGAGAACATTATGGCCCACAAATGGCGGTGACCAAGCCATCGAGCACATGGTGGTGGAATGAGGCTGAAAGGAAGAGAAAGCGTAGAGTGTTTAAATACAAGTTGTACGCAGCAGAAGGCAAACTCAAGCATTCTGTCAAGAAAGGGTTTCGCTGGTTAAAGATCAAATGCATCAAGATCTTATTTTCTCGGAGGAATAGAGAGGCAGAGCAACTAAGGGTTGTGTTGCCCCTTTTCAGAAATTGTTGTATTAATACCAAAAACAAGGAGCTCTTTCATTTTGAAAATGGGGCTCTGATGTCTGGAAAACGAGAAATGGAGATGGAGAAAAAACGTTCCAAAGGAAGCTTCCTCAGCTTGTTTGATTGGAACTCCAAATCTCGAAAGAAGCTGGTCTGGAACGATCCTGAGGTTCCAAAGCAAGGGAAGGAAAATGTGGAGAACTTACCGAAGTCACAGCTCACTAGGAAAAAGGTGGATGAAATTGGAGAAAGTCCAAGTAACATTCAAAGTTGTGATTTCGACAGCACCCTTTCAATTTGTAGTGATGAAGGATGTGGGAGTAAAGCCCCTGGGTTAGTAGCAAGACTCATGGGTTTGGACTTGTTGCCAGCTGCGGCAGTCACTGAGCTCTCCTGCACTTCATTGTATGGCTCTAAATCTCATGGAGCTTCTCATTGTAATGAGGGTGCTCTTCACTCAGCGGATGACTTTTGCCCTGCAGACTACATAAACACACTGCTTAAGCCAGAGAAGTCTTCTTTGGATGCCATGGAATCAAGGGCACGAAAAGTGGAAAGCCTTCCAATAAAGAGATTTCAAACTGAAATGTTGCCTCCAAAGTCAGCTAAAACCATTCCAGTTACTCACAATAAACTGTTGTCTCCTATCAAGAGTCCTAGTATTCTGCCACCAAAAAATGCAGATCACGTAATGGAGGCAGCTGCTAAGATAATTGAGGCAAGCCCTCGGCCATATTTGAGGAATAGAACAACATCAACCGAGCCTTCATCTGTTCCCTTGAGAATTCTCAATTTGAAAGAGAGATTTGAAGCTGCACAATATGCATCCATGCCTGGAAAGCTTGTGAATCTGAGCAATGCCTATCCTGCAAATGGCAGGCTTAGTGAGAGGAACAGTAATTTGTATAAATGCACTTCAGCAGTCAAGGGTTCAAGAGGTTCAGAAAAGAATAGTTCTTGCCATTTAGCCAGTAAAGGAAAATCAGTTTCACTTACAGCCAAAAACAATGCTCATAGTAGAGATACATTGATTTCAAATGATGATATTCCATGCATGAAACAGAAAGAGAAGAATGAGATAAAGTCAAATCAACTCTCAAGGAGCCACAAACCTAGTACACAAAAAACTATGCAGCAGAGGCCTTGCTCAAGCCGGAATAGCAATGTGCTTGGGCAGAACAATCAAAAGCAAAATAGCATGACTGCCAAGGGTAAATCAACTTCAAAAATAGATTCTAATAAGCTAACAACACGAGCTTCATCTTCAGAAACTTCTGGAATAAGGAAGACAACGAACAAGGGTACTATAACTGCAAATATTCAACCTAAAAGGTCAAGCACTAGGGCAACTGACAACCAAAAGCAGTTTTCAAGATCCAAAACAGTGAGTATTTCCCAGAAGAAAAAGATTAGCAAAGATGTTCATGAGGGAAGAGGTCCTGATAATGCAGTAAATAATTTTGGAAGTAAGTCCATTAAATGCAATTTTACGACGGATGGAAGTTTTGATCAGGATGCATTTAACATGATAGAAAGCAAGGATGTTATTTCATTTACATTTACATCTCCCTTGAGGAGAACTATGCCtgagtcatcatcctctaccgagcaagtgatgggaACCAGAAATAGAATTGATGTCAACTCTCTTGGGCATAGTGATAATCTTTATCCCAAAAAATTATCATTATCTCCGCCAGGGCAACCTATGATAGATAGTGATGCTTTAAGTGTCCTGTTGGACAAAAAGCTGCAAGAATTGGCATCTAGAATTAACTTACCTCAATGTACCTTGGCCAGAGAGGGGTCTTCTACTGGTTTGAGATCTAGTGTGCAAGATCAAGTTCCCAGTGTGTCAAGCACCACGCCTAAGGAACAAAACAAAAGCTTTTGCAGTGACCTGTCTAGTGATAAACTGGATAGCATGCATAACTCTCATTATTGTTCAAGTGATGATCCAGTGCTTAACATGAATCAGCAACTGCAGACATCAGAAGTAAGTGAAGATCCTAGCTGCAGTAGCAACAGTGAAAGAGGAAATGATCTAGTTTGTTGGCATTCCACTGCTGTTGCAGGTTTTGAAACTCCTTTTGTCTGCGAAAGTTACTTGGATAGTGAAGACAGTGCATATGGCAGCACAGTTTATTCATCCACACAAGATGAAGAAGTATCTAGTTTTTCCCAGATAAGCGAACCTGTATCACTTGAAAGTGAGGTGAAAGGGTCAGAGGAAAGCTCTTCCCCATTGGGGGGCGGAAAAATGACCATCAAACAAATAAGTGAAATATCAAATTCTGTTGATTTTAAAAGATCAAGGAACACGGTACTTGAATACGTACATGATATTCTTTGCAATGCAGAGTTCATGGCAGAAGAATTTGTCATGGGTCAAACAAGTGCACTCATAATGCCAAATGTCTTTGATCTGTTGGAGAATCAGCATTATGGAACAGAAAATTTCGGAGAAGAGTACTCTATGCTTGAAAGGAAGGCTATATTTGACTGTGCGAGTGAGTTGCTGGAGTTGAGATGTAAGGAAGCTTTTGTTGGAACATGCAAAGCATGGTCTGGATGGATGATGTTAATTCAGAGGAAGAGCTGGATGGCAGAGGAACTGTACAAGGAATTGCTGGGTTTTAGAAGCATGGAAGAGGTAATGGTGGATGAGCTTGTCACCAAGGACATGAGCTCTGGATGTGGGAAATGGCTTGACTTTGATGTTGAAGCATTTGAAGAGGGTTTAGAGATTGAGGGGGACATACTATCTCATTTGATTAATGAATTGGTTTCAGATTTGTTACTTGTCTAA 3192 0.4085 MEGIQHHYARSCSYLHEVNVKSMNNDNKMWVASTTTPSALYSNEVAYGEHYGPQMAVTKPSSTWWWNEAERKRKRRVFKYKLYAAEGKLKHSVKKGFRWLKIKCIKILFSRRNREAEQLRVVLPLFRNCCINTKNKELFHFENGALMSGKREMEMEKKRSKGSFLSLFDWNSKSRKKLVWNDPEVPKQGKENVENLPKSQLTRKKVDEIGESPSNIQSCDFDSTLSICSDEGCGSKAPGLVARLMGLDLLPAAAVTELSCTSLYGSKSHGASHCNEGALHSADDFCPADYINTLLKPEKSSLDAMESRARKVESLPIKRFQTEMLPPKSAKTIPVTHNKLLSPIKSPSILPPKNADHVMEAAAKIIEASPRPYLRNRTTSTEPSSVPLRILNLKERFEAAQYASMPGKLVNLSNAYPANGRLSERNSNLYKCTSAVKGSRGSEKNSSCHLASKGKSVSLTAKNNAHSRDTLISNDDIPCMKQKEKNEIKSNQLSRSHKPSTQKTMQQRPCSSRNSNVLGQNNQKQNSMTAKGKSTSKIDSNKLTTRASSSETSGIRKTTNKGTITANIQPKRSSTRATDNQKQFSRSKTVSISQKKKISKDVHEGRGPDNAVNNFGSKSIKCNFTTDGSFDQDAFNMIESKDVISFTFTSPLRRTMPESSSSTEQVMGTRNRIDVNSLGHSDNLYPKKLSLSPPGQPMIDSDALSVLLDKKLQELASRINLPQCTLAREGSSTGLRSSVQDQVPSVSSTTPKEQNKSFCSDLSSDKLDSMHNSHYCSSDDPVLNMNQQLQTSEVSEDPSCSSNSERGNDLVCWHSTAVAGFETPFVCESYLDSEDSAYGSTVYSSTQDEEVSSFSQISEPVSLESEVKGSEESSSPLGGGKMTIKQISEISNSVDFKRSRNTVLEYVHDILCNAEFMAEEFVMGQTSALIMPNVFDLLENQHYGTENFGEEYSMLERKAIFDCASELLELRCKEAFVGTCKAWSGWMMLIQRKSWMAEELYKELLGFRSMEEVMVDELVTKDMSSGCGKWLDFDVEAFEEGLEIEGDILSHLINELVSDLLLV 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02175 1063 MobiDBLite consensus disorder prediction 493 592 - -
Gma19g02175 1063 Pfam Domain of unknown function (DUF4378) 904 1055 IPR025486 -
Gma19g02175 1063 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 153 1063 - -
Gma19g02175 1063 MobiDBLite consensus disorder prediction 435 455 - -
Gma19g02175 1063 Pfam DUF761-associated sequence motif 229 254 IPR032795 -
Gma19g02175 1063 Pfam Domain of unknown function (DUF3511) 66 107 IPR021899 -
Gma19g02175 1063 MobiDBLite consensus disorder prediction 484 617 - -
Gma19g02175 1063 PANTHER DUF4378 DOMAIN PROTEIN 153 1063 - -
Gma19g02175 1063 MobiDBLite consensus disorder prediction 730 763 - -
Gma19g02175 1063 MobiDBLite consensus disorder prediction 849 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02175 Gma-Chr19 50587743 50596158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02175 155 1061 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 30.313 1.97e-96 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02175 - - gmx:100804688 1769.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02175 19 50587743 50596158 Gma03g02142 03 46891768 46895980 ECH
Gma19g02175 19 50587743 50596158 Gma19g02175 19 50587743 50596158 ECH
Gma19g02175 19 50587743 50596158 Gma03g02143 03 46901528 46901881 GST