Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02168 ATGGTTTGCGAGGAAGAATTGTTGATAGAAAAAGTGTGCTCGCTCTATGAACAAATCTCAAGCCTCGAGAGTCTCAAACCTTGCAAGAATGTCGACATGCTGTTCACCAAACTAGTCCTGACATGCATACCCCCAAGCCCAATCGATGTCACAAAGCTAAACAAAACCGTTCAAGACATTCGATCCCACCTTATAAAACTATGTGGTGAAGCCGAGGGACACTTAGAGAGCCACTACTCAACCATCCTAGGCTCATACGACAAACCCCTTAACCACCTTAATATTTTCCCCTATTATTCTAACTACCTCAAACTTGGTCACCTCGAGTTCACTATCCTTAGCCAACACTGCACCCATGTTCCCACCAGAGTTGCCTTCGTGGGCTCGGGGCCCCTTCCTCTTACCTCAATTGTGTTGGCATCGAACCACTTACCTTCCACCACTTTCCACAACTATGACATGGACCCTTTAGCCAATTCCAACGCTATGCGCTTGGTTTCCTCTGACCCTGACTTGTCCAAGCGCATGTTTTTCCACACCAACGACATATTGGAAGTGTCGAACGCTTTGAAGGAGTACGAGGTTGTTTACTTGGCAGCACTTGTGGGCATGGACAAGGAGGGGAAGAATCGAATCATTGATCACTTGGGCAAGCACATGAACCCTGGGGCACTTCTTATGCTGAGGAGTGCTCATGGGGCAAGGGCTTTTCTCTACCCTGTGGTTGAGCCTTGTGATTTTCGAGGTTTTGAGGTTCTCTCTGTGTTCCACCCCTCCGATGAGGTCATCAACTCGGTTGTCATAGCACGTAAATTATATCACTCTCTTGAGCAAGGCCTTGTTGGCTCTATGATCCTACCTAACAAGTGTTCCGAGATTCAAGCCTTCAACCCTCTCAACCATGGGAACATGATTGAGGAATTGGCCGTTGAGGAGCAACTCTTGTGA 948 0.4757 MVCEEELLIEKVCSLYEQISSLESLKPCKNVDMLFTKLVLTCIPPSPIDVTKLNKTVQDIRSHLIKLCGEAEGHLESHYSTILGSYDKPLNHLNIFPYYSNYLKLGHLEFTILSQHCTHVPTRVAFVGSGPLPLTSIVLASNHLPSTTFHNYDMDPLANSNAMRLVSSDPDLSKRMFFHTNDILEVSNALKEYEVVYLAALVGMDKEGKNRIIDHLGKHMNPGALLMLRSAHGARAFLYPVVEPCDFRGFEVLSVFHPSDEVINSVVIARKLYHSLEQGLVGSMILPNKCSEIQAFNPLNHGNMIEELAVEEQLL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02168 315 PANTHER SYNTHASE, PUTATIVE-RELATED 1 314 - -
Gma19g02168 315 PANTHER NICOTIANAMINE SYNTHASE 3 1 314 IPR004298 GO:0030410|GO:0030418
Gma19g02168 315 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
Gma19g02168 315 Pfam Nicotianamine synthase protein 5 272 IPR004298 GO:0030410|GO:0030418
Gma19g02168 315 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02168 Gma-Chr19 50543129 50544076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02168 1 312 Nicotianamine Synthase Gene Family AT5G56080 61.801 2.90e-138 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02168 K05953 - gmx:100803630 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02168 19 50543129 50544076 Gma19g02168 19 50543129 50544076 ECH
Gma19g02168 19 50543129 50544076 Gma03g02131 03 46830444 46831742 GST