Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02163 ATGGACTCTTTGTCTTTGCACTCAAACCTCCATTCCGTTAACAATAAGCGCCGCCAAATCACACACCAAAACTCCTTCGCTCTCACTCCCTCCTGGACTTCCCTAACCGAACAGCGCCTCTACTCCTCCAAGCTCCTCCACTCGCTCCGCCGCAACAGCAACCCTACCGCCGCCCTCGAAGTCCGCGCCTCCGCTGACCGCGTCCTCGCCGCCACTGCCAAAGGCCGAACTCGCTGGAGCCGCGCCATTCTCTCAAATCCGATCTGCCGGTGGAAGCAGAGACACCACAAGAAGGTCAAGAAGTACTCCGCCAACAAATTCATGAAGAAGACGACGCCTGAGATTCGGAGAAGCTTGCCGGCTGTGCAGAAGAAAGCGCGCGTTCTCGGAAAGTTAATTCCTGGTTGCCGGAAGGTGTCGTTCCCGAAGCTTCTAGAAGAAGCCGGTGACTATATTTCGGCGTTGGAGATGCAAGTGCGAGCCATGAAGGCTCTCGCCGACCTCCTCGCCACCGGTGCTCCGCCGCCAGCTCCGATCGGTTTGAGTTGA 549 0.5756 MDSLSLHSNLHSVNNKRRQITHQNSFALTPSWTSLTEQRLYSSKLLHSLRRNSNPTAALEVRASADRVLAATAKGRTRWSRAILSNPICRWKQRHHKKVKKYSANKFMKKTTPEIRRSLPAVQKKARVLGKLIPGCRKVSFPKLLEEAGDYISALEMQVRAMKALADLLATGAPPPAPIGLS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02163 182 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 11 181 IPR044660 GO:0006355
Gma19g02163 182 PANTHER TRANSCRIPTION FACTOR BHLH150 11 181 - -
Gma19g02163 182 CDD bHLH_AtIBH1_like 116 166 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02163 Gma-Chr19 50482833 50483781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02163 32 162 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 50.000 1.00e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02163 - - gmx:100802046 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02163 19 50482833 50483781 Gma03g02128 03 46783545 46784333 ECH
Gma19g02163 19 50482833 50483781 Gma19g02163 19 50482833 50483781 ECH
Gma19g02163 19 50482833 50483781 Gma03g02128 03 46783545 46784333 GST
Gma19g02163 19 50482833 50483781 Gma10g01445 10 41527717 41529423 PCT
Gma19g02163 19 50482833 50483781 Gma20g00939 20 35969565 35970594 PCT
Gma10g01445 10 41527717 41529423 Gma19g02163 19 50482833 50483781 PCT
Gma20g00939 20 35969565 35970594 Gma19g02163 19 50482833 50483781 PCT