Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02162 ATGGGTGCCGGTCTAGTTGCGTTCCTCTTAATGGTTCTTGTGCAATTGGTCTATGCAGTGATGAACATTACTTCAAAGCTTGCAATAGAATCTGGAATGAGCCCTCTTGTCCTTGTTGCTTATCGACAACTCTTTGCTACTGTGTCCATTGCTCCCTTTGCTTATTGGCTCGAGTGGAATACGCTTCCCAGGATTACACAGCGTCTTATGATTCAGATATTATTTTCGTCCCTGACCGGAGTTACAGGAAATCAGATGCTTTATTTTGTGGGGCTGAAATATTCATCCGCTACAATTGCATGTGCACTGACAAATTTGCTCCCAGCTTTCACTTTCATCCTTGCAGTTCTCTTCAGACAAGAGAATTTGGGAATCAAGAAGAGGGCTGGTCTAGCAAAGGTATTCGGGACAATATTGTGTGTGAGTGGAGCCTTGCTTTTGTCATTTTACCATGGAAAAACCATTGGTTTAGGCCAATCAAGTATTCACTGGAGATATGCTGAGAAAATGGAAGGAACTAGCTCTTCTGGCAAAGGAAACATGTTCCTAGGCCCTTTGGTCGTAATTCTTAGCACCCTTGTTTGGGCAGCATGGTTCATAATTCAAAAAGACATAAGCAAGACATTTCCAGCTCCTTACACGAGCACTGGCTTAATGTGTTTCATGGCAAGCTTTCAATGCGTGATCATTGCCGTGTGTGTCGACCACAGGGCCTCAGCTTGGTCACTCCACAATGCTATGAGACTTTCCTCTGCCCTTTATGCGGGAATATTTTGCACTGGATTAGCCTATTGCCTCATGTCGTGGACCATTGAGAGAAAAGGTCCTCTTTATGTCTCTGTATTTACCCCTTTGCAGCTTGTCCTCACTGCCATTTTGAGCTGGGCTTTGCTTCGGGAGAAATTATATGTTGGAACTGCCGTAGGGTCTCTCTTGATAGTTTTGGGACTCTATTCTGTTCTCTGGGGAAAGAGTGAAGAGGTGAATAAGGGAGACGGTATTGAAGAAGATGCAGTTAAAGAAGCAGTCAAGGATTCGAAGAATGACATGGAATTGCAATCATATGTGCCATCCAATGATCACTACTTCCACACCACCATTATCAATAATGGGGAGACTCCAAAATCTGTTATGAAAGTTGTCTTTGATGCCAATGTTATTCCTCCTCTTGTTCAAATTCTTCAACATTCTGAGTTTGACGTCAAGAAGGCGGCTGCCAGGGCCATCTTCTACGTGACTTCTGAAGGATCTCAAGACCATATCAGacccaatggttgtgtcaacttgtcttga 1293 0.4277 MGAGLVAFLLMVLVQLVYAVMNITSKLAIESGMSPLVLVAYRQLFATVSIAPFAYWLEWNTLPRITQRLMIQILFSSLTGVTGNQMLYFVGLKYSSATIACALTNLLPAFTFILAVLFRQENLGIKKRAGLAKVFGTILCVSGALLLSFYHGKTIGLGQSSIHWRYAEKMEGTSSSGKGNMFLGPLVVILSTLVWAAWFIIQKDISKTFPAPYTSTGLMCFMASFQCVIIAVCVDHRASAWSLHNAMRLSSALYAGIFCTGLAYCLMSWTIERKGPLYVSVFTPLQLVLTAILSWALLREKLYVGTAVGSLLIVLGLYSVLWGKSEEVNKGDGIEEDAVKEAVKDSKNDMELQSYVPSNDHYFHTTIINNGETPKSVMKVVFDANVIPPLVQILQHSEFDVKKAAARAIFYVTSEGSQDHIRPNGCVNLS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02162 430 Pfam EamA-like transporter family 8 148 IPR000620 GO:0016020|GO:0016021
Gma19g02162 430 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020|GO:0016021
Gma19g02162 430 SMART arm_5 373 414 IPR000225 GO:0005515
Gma19g02162 430 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 148 - -
Gma19g02162 430 Gene3D - 366 428 IPR011989 -
Gma19g02162 430 PANTHER WAT1-RELATED PROTEIN 6 349 IPR030184 GO:0016021|GO:0022857
Gma19g02162 430 Pfam Armadillo/beta-catenin-like repeat 380 412 IPR000225 GO:0005515
Gma19g02162 430 PANTHER WAT1-RELATED PROTEIN 6 349 - -
Gma19g02162 430 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 325 - -
Gma19g02162 430 SUPERFAMILY ARM repeat 376 422 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02162 Gma-Chr19 50467825 50472188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02162 5 357 Nodulin-like Gene Family AT1G09380 58.592 3.63e-146 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02162 - - gmx:100801512 708.368