Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02153 ATGGGTGCCGGTCTAGTTGCGTTCCTCTTAATGGTTCTTGTGCAATTGGTCTATGCAGTGATGAACATTACTTCAAAGCTTGCAATAGAATCTGGAATGAGCCCTCTTGTCCTTGTTGCTTATCGACAACTCTTTGCTACTGTGTCCATTGCTCCCTTTGCTTATTGGCTCGAGTGGAATACGCTTCCCAGGATTACACAGCGTCTTATGATTCAGATATTATTTTCGTCCCTGACCGGAGTTACAGGAAATCAGATGCTTTATTTTGTGGGGCTGAAATATTCATCCGCTACAATTGCATGTGCACTGACAAATTTGCTCCCAGCTTTCACTTTCATCCTTGCAGTTCTCTTCAGACAAGAGAATTTGGGAATCAAGAAGAGGGCTGGTCTAGCAAAGGTATTCGGGACAATATTGTGTGTGAGTGGAGCCTTGCTTTTGTCATTTTACCATGGAAAAACCATTGGTTTAGGCCAATCAAGTATTCACTGGAGATATGCTGAGAAAATGGAAGGAACTAGCTCTTCTGGCAAAGGAAACATGTTCCTAGGCCCTTTGGTCGTAATTCTTAGCACCCTTGTTTGGGCAGCATGGTTCATAATTCAAAAAGACATAAGCAAGACATTTCCAGCTCCTTACACGAGCACTGGCTTAATGTGTTTCATGGCAAGCTTTCAATGCGTGATCATTGCCGTGTGTGTCGACCACAGGGCCTCAGCTTGGTCACTCCACAATGCTATGAGACTTTCCTCTGCCCTTTATGCGGGAATATTTTGCACTGGATTAGCCTATTGCCTCATGTCGTGGACCATTGAGAGAAAAGGTCCTCTTTATGTCTCTGTATTTACCCCTTTGCAGCTTGTCCTCACTGCCATTTTGAGCTGGGCTTTGCTTCGGGAGAAATTATATGTTGGAACTGCCGTAGGGTCTCTCTTGATAGTTTTGGGACTCTATTCTGTTCTCTGGGGAAAGAGTGAAGAGGTGAATAAGGGAGACGGTATTGAAGAAGATGCAGTTAAAGAAGCAGTCAAGGATTCGAAGAATGACATGGAATTGCAATCATATGTGCCATCCAATGATCACTACTTCCACACCACCATTATCAATAATGGGGAGACTCCAAAATCTGTTATGAAAGTTGTCTTTGATGCCAATGTTATTCCTCCTCTTGTTCAAATTCTTCAACATTCTGAGTTTGACGTCAAGAAGGCGGCTGCCAGGGCCATCTTCTACGTGACTTCTGAAGGATCTCAAGACCATATCAGTGATATGCAAGAGATGAATCCAATATTGAACAGAGACCAGAACATGATGTCTGCTGTCATTGATGCAAATATTATTCTTCCTCTTGTTCAAATTCTTCTTCATGCTGAGTTTGATATCAAGAAGGAAGCTGCCTTGGCGATCTTCAATGTAACTGATGGAGGATCTTATCACCATATCAAGTATGGTTCACCATTACATTTTATCTGCCTTTATCATAATTTTTCCCCATTCTATTACTTAAAGTTAAAGGTCTAG 1521 0.4227 MGAGLVAFLLMVLVQLVYAVMNITSKLAIESGMSPLVLVAYRQLFATVSIAPFAYWLEWNTLPRITQRLMIQILFSSLTGVTGNQMLYFVGLKYSSATIACALTNLLPAFTFILAVLFRQENLGIKKRAGLAKVFGTILCVSGALLLSFYHGKTIGLGQSSIHWRYAEKMEGTSSSGKGNMFLGPLVVILSTLVWAAWFIIQKDISKTFPAPYTSTGLMCFMASFQCVIIAVCVDHRASAWSLHNAMRLSSALYAGIFCTGLAYCLMSWTIERKGPLYVSVFTPLQLVLTAILSWALLREKLYVGTAVGSLLIVLGLYSVLWGKSEEVNKGDGIEEDAVKEAVKDSKNDMELQSYVPSNDHYFHTTIINNGETPKSVMKVVFDANVIPPLVQILQHSEFDVKKAAARAIFYVTSEGSQDHISDMQEMNPILNRDQNMMSAVIDANIILPLVQILLHAEFDIKKEAALAIFNVTDGGSYHHIKYGSPLHFICLYHNFSPFYYLKLKV 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02153 506 PANTHER WAT1-RELATED PROTEIN 6 349 - -
Gma19g02153 506 SMART arm_5 434 474 IPR000225 GO:0005515
Gma19g02153 506 SMART arm_5 373 414 IPR000225 GO:0005515
Gma19g02153 506 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 325 - -
Gma19g02153 506 Gene3D - 366 430 IPR011989 -
Gma19g02153 506 Pfam Armadillo/beta-catenin-like repeat 440 473 IPR000225 GO:0005515
Gma19g02153 506 Pfam Armadillo/beta-catenin-like repeat 380 412 IPR000225 GO:0005515
Gma19g02153 506 Gene3D - 431 487 IPR011989 -
Gma19g02153 506 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 148 - -
Gma19g02153 506 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020|GO:0016021
Gma19g02153 506 Pfam EamA-like transporter family 8 148 IPR000620 GO:0016020|GO:0016021
Gma19g02153 506 PANTHER WAT1-RELATED PROTEIN 6 349 IPR030184 GO:0016021|GO:0022857
Gma19g02153 506 SUPERFAMILY ARM repeat 375 483 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02153 Gma-Chr19 50401053 50413387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02153 5 357 Nodulin-like Gene Family AT1G09380 58.592 9.86e-145 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02153 - - gmx:100798142 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02153 19 50401053 50413387 Gma03g02118 03 46716419 46719467 GST