Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02142 ATGGGTGGAGATGGAGCCACGGCAAACGCGGAGGCGCAGTACGCCACGGCGAAGATATCGGTGTGGTGGGACATCGAGAACTGCCACGTCCCCAAGGGTTCGGATCCGCACGCGATCGCGCAGAACATCAGTTCCGCCCTCGTTCGCATGAACTACTGCGGCCCCGTCTCCATCTCCGCCTACGGCGACACCACTCGCATCCCCGCCTCTGTGCAGCACGCGCTCTCCAGCACCGGTATCTCCCTCAACCACGTCCCCGCCGGCGTGAAAGACGCAAGTGACAAGAAGATTCTTGTTGATATGCTGTTCTGGGCAGTGGACAATCCTGCACCTGCTAATTATTTATTAATTTCGGGTGACCGAGACTTCTCAAATGCTCTCCATCAACTTCGGATGAGGAGATATAATATTCTTCTTGCACAACCTCAGAAAGCATCTGCACCCCTAGTTGCAGCTGCCAAGAGTGTATGGCTTTGGACTAGCCTCTTAGCTGGAGGACCTCCTCTTTCTAATGGTGAATCACAACAACTTGGTAATGGTAGCCTTAGCCATGTATCATCTTCTGACTCCTTACAAATTCCAGTTACAAGTGCTGCTCAGATACAGCAACAGGTGGATTCCTATTCAGAAGTACATGTAGGAAATTCAAAATTTCCAAATGGAGGAAGGGGATTTGATTCTAGATATCAGGGGAAAACAAATTGGAGAAACCCGAGTCAATCAAATGGACCCAGAGCCATGAATCCACCGCCAGTTGGACTTCAAGATAATCGCAATCGTAATAATACAAACTCTCATCGACCTGGCAACTTTAATCCAAATGTTCCGCTAAGTGGACCTGCTACAAATTATGTTCATGGCAATACTGATCAGTTATGGAGCAATAACAGTAATCTACAGGGCAATCATCAAATTCCTTATTCACAGCCATTAAGACCAAACAACTTCCCATTGCAACCTCCTTTTGCACCTAGTAATTCATATACTCCAAATTCCCATACTTTTCCAACTTCTATGGTGCCACCTAGGACTGGTGGTCCCAATTTCACTTCAGGGCCACATACCAATGTGCCAGATATTGGTAATCTGAACATTTCTGGATATCCTAATAGTGTTCATAACCCACCAACTGTTCCACAACGGAGTGGAGAGCTGAAACAGAATTCTAATAATAATGCTCCACATCATTTAAGATCAATTGATGAAAAAAATGGACATATGGTACATAACAGTGGCACAAAACAATCACACCAAGGTTACCAACATGGTCCAGAATATCAACCTCCGCCATTGGCAGCAATGGGTAATAATAACCCTTCTGGTAATGGTATGTGGGGTTCTCCAGGATGTCCTAAACCTTCTGAATATGTACAAGGCCTAATAGGTGTTGTTTTACTTGCCTTGAACTCACTAAAAAATGCAAAGATGATGCCAACTGAGGCAAATATAACTGATTGCATCCGGTATGGAGATCCCAAGCACCGCAACACTGATGTTAAGAAGGCTCTTGAAAGTGCTATTGAGCAGAATATGGTGGTGAAACAGAATTTAGGTGCTTTGCCGTTGTATGTTGGTAAGAATGATAAACTTTGGAAATGTGTAAATCCTTTAGGTGGTACTCCTAAGCAGCACTCAAAAGAAACATGGGATGAAATTGAAAAGTTTTTAACAACTCCTGCTGGAAGATCAGCACTAATGGGTACACAGTGCAAGTATGAAGCAGGTATTGTGATTAAGAGTATGTGCTTTAAAGATCTTGCTTTGGGTGATGTCCTTCAGATATTGAACATGTTAATTACCCATAAAAAATGGGTTACGCATCATCCATCTGGTTGGCAACCACTTAACATTACTCTTCCCGAGACAAACCCTGGTTCAGGGGTTGTAGCTGGTGCATAA 1899 0.4439 MGGDGATANAEAQYATAKISVWWDIENCHVPKGSDPHAIAQNISSALVRMNYCGPVSISAYGDTTRIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLSNGESQQLGNGSLSHVSSSDSLQIPVTSAAQIQQQVDSYSEVHVGNSKFPNGGRGFDSRYQGKTNWRNPSQSNGPRAMNPPPVGLQDNRNRNNTNSHRPGNFNPNVPLSGPATNYVHGNTDQLWSNNSNLQGNHQIPYSQPLRPNNFPLQPPFAPSNSYTPNSHTFPTSMVPPRTGGPNFTSGPHTNVPDIGNLNISGYPNSVHNPPTVPQRSGELKQNSNNNAPHHLRSIDEKNGHMVHNSGTKQSHQGYQHGPEYQPPPLAAMGNNNPSGNGMWGSPGCPKPSEYVQGLIGVVLLALNSLKNAKMMPTEANITDCIRYGDPKHRNTDVKKALESAIEQNMVVKQNLGALPLYVGKNDKLWKCVNPLGGTPKQHSKETWDEIEKFLTTPAGRSALMGTQCKYEAGIVIKSMCFKDLALGDVLQILNMLITHKKWVTHHPSGWQPLNITLPETNPGSGVVAGA 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02142 632 CDD PIN_limkain_b1_N_like 18 142 - -
Gma19g02142 632 PANTHER LIMKAIN B LKAP 2 617 IPR024768 GO:0005777|GO:0010468|GO:1903231
Gma19g02142 632 MobiDBLite consensus disorder prediction 360 395 - -
Gma19g02142 632 Pfam OST-HTH Associated domain 569 618 IPR025677 -
Gma19g02142 632 Pfam NYN domain 18 154 IPR021139 GO:0004540
Gma19g02142 632 MobiDBLite consensus disorder prediction 360 447 - -
Gma19g02142 632 Gene3D - 9 161 - -
Gma19g02142 632 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 617 - -
Gma19g02142 632 MobiDBLite consensus disorder prediction 212 282 - -
Gma19g02142 632 MobiDBLite consensus disorder prediction 254 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02142 Gma-Chr19 50299601 50304103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02142 8 200 C2H2 Transcription Factor Family AT5G61190 70.466 1.33e-85 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02142 - - gmx:100794608 1300.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02142 19 50299601 50304103 Gma03g02106 03 46608032 46611343 ECH
Gma19g02142 19 50299601 50304103 Gma19g02142 19 50299601 50304103 ECH
Gma19g02142 19 50299601 50304103 Gma03g02106 03 46608032 46611343 GST