Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02115 ATGGCGTCTCCATTATCAGCTCAATTGGTTCAATGTCAGAACTCACTTCCACCTCTTCAGGGTAATTTTAGCCAAGATGTGTCTAAGGTTCAAAGGTCGCGTGTGGTATGTTACGGTACCAGATCACCGCTTGGTTATTATGGTAAAGcattgacatcaagatcacataacgccctgaggttTTCTGTCACGCGACAATCTGAAGCACGGTCAATTGGATATAGGAGAATGACATGTGTCAATGCTGCAGACAATGTTGTAGAGCTTCAAGCCAAGGTGACAACCAAGTGTTTCTTTGATGTAGAAGTTGGGGGTGAACCTGTGGGCAGGATTGTTTTGGGCCTATTTGGAGAGGTTGTTCCTAAAACCGTTGAAAATTTCCGTGCTTTGTGCACAGGCAAGCAATCAACTTTTTTCTGCATCATTTTTCTTTTTAAAGGATATGGTTACAAAGGAAGCTCCTTCCATCGTATAATCAAATATTTCATGATTCAGGGAGGAGACTTTACAGAAGGAAATGGAACTGGTGGAATTAGTATCTATGGTCCTAGTTTTAAAGATGAGAGTTTTGCCTTAAAGCATGTCGGTCCTGGAGTTCTGAGCATGGCAAATGCTGGTCCTAATACTAATGGGAGTCAATTTTTCATTTGCACTGTAAAGACTCCATGGCTAGACAATCGTCACGTTGTATTTGGACATATCATTGATGGAATGGATGTTGTGAAGACACTTGAATCCCAGGAGACGAGTAGGTTAGATGTCCCTCGAAAGCCTTGCAGAATTGTTAATTGCGGAGAACTGCCTATAGAGGGTTGA 816 0.4032 MASPLSAQLVQCQNSLPPLQGNFSQDVSKVQRSRVVCYGTRSPLGYYGKALTSRSHNALRFSVTRQSEARSIGYRRMTCVNAADNVVELQAKVTTKCFFDVEVGGEPVGRIVLGLFGEVVPKTVENFRALCTGKQSTFFCIIFLFKGYGYKGSSFHRIIKYFMIQGGDFTEGNGTGGISIYGPSFKDESFALKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHIIDGMDVVKTLESQETSRLDVPRKPCRIVNCGELPIEG 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02115 271 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 115 130 IPR002130 GO:0000413|GO:0003755
Gma19g02115 271 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 213 225 IPR002130 GO:0000413|GO:0003755
Gma19g02115 271 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 155 167 IPR002130 GO:0000413|GO:0003755
Gma19g02115 271 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 198 213 IPR002130 GO:0000413|GO:0003755
Gma19g02115 271 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 226 241 IPR002130 GO:0000413|GO:0003755
Gma19g02115 271 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 150 167 IPR020892 GO:0003755|GO:0006457
Gma19g02115 271 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 98 266 IPR002130 GO:0000413|GO:0003755
Gma19g02115 271 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 50 270 - -
Gma19g02115 271 Gene3D - 84 270 IPR029000 -
Gma19g02115 271 SUPERFAMILY Cyclophilin-like 89 267 IPR029000 -
Gma19g02115 271 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 99 265 IPR002130 GO:0000413|GO:0003755
Gma19g02115 271 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 50 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02115 Gma-Chr19 50040736 50042934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02115 109 264 U-box Gene Family AT5G67530 40.127 1.04e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02115 K03768 - gmx:100785805 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02115 19 50040736 50042934 Gma03g02078 03 46338128 46340938 GST