Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02113 ATGAGAATGAAGAAGCTGATTTTAATACTCATAGCAGCATTTACCTTCGTTTCTGTGGCTAGATCTGCGGCTGATCATTTCTTCGAAAACGATGGCGTTTCACTGGCAGTTGCAGCAACGCCCGGACCTCCACCTCTCATGGTCCCCCTCACTCTTATTCAGGGAGCTGCTTCCAAAGGAGCCGTCTGTTTGGATGGAACATTGCCTGGTTACCACTTTCATCCTGGATTTGGATCTGGGGCAAATAGTTGGCTCATTCAATTGGAGGGAGGAGGATGGTGTAATACCATCAGAAGTTGTGTCTTTAGAAAAACTACTCGTCGTGGTTCCTCAAAATACATGGAAAAACAACTAGCATTCACAGGGATATTGAGCAATAAAGCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTTATAGTACGTTACTGTGATGGGGCATCTTTCAGTGGAGATAGTCAAAATGAGGCTGCACAGCTTCAATTCCGAGGACAAAAAATATGGCAAGCTGCAATGCAGGAATTATTGTTCAAGGGAATGCAGAAGGCCAACCAGGCCCTTTTGTCCGGATGCTCTGCGGGTGGTCTGGCATCTATAATACATTGTGATGAGTTCCGGAGCTTGTTTCCTACATCTACCAAAGTGAAATGTTTGAGTGATGCAGGGTTTTTCCTAGATGCGGTTGACATATCTGGGGGTCACACACTGAGGAATCTGTTTGGAGGTGTAGTTAAATTACAGGAGGTGCAAAAAAATCTGCCAAACAGTTGTCTCAACCAACTGGACCCAACTTCGTGCTTTTTTCCTCAGAATTTGATCAACCATGTTGAAACTCCATTGTTTCTACTCAATGCAGCTTATGATGCATGGCAGGTCCAAGAAAGTTTGGCCCCACATTCAGCAGATCCCCATGGCTCTTGGAATGATTGTAAATCAAATCATGCACGCTGTAACTCATCTCAAATTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTAAATGATGTGAAAGGCTTCTCAGGGACATCTCAAACTGGGTTATTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAAGATACATGGTTTGCTGATGACTCTCCACTAATTAACAACATGCCAATTGCAATTGCTGTTGGAGACTGGTTTTTTGATCGGAAAACTGTCAAAGCTATCGACTGTGCTTACCCCTGTGACAATACATGCCATAATCTGGTCTTCAATGCTGTTAAATCTGCTGTGGTGGACTACCAGTCCACAAGTGATGATGACACACCTACCAATACCATGACCATGATATATTCCCGCTCCACAAGGCTGACTTTTAGTAGTGGCCTATATATGCTAAGTCAAGACCTGGATTCAGCAATAGATACTTTAGGACTTGAAGAACCAATTTGGTTAAGGAAGAACAACCTGTAA 1431 0.4312 MRMKKLILILIAAFTFVSVARSAADHFFENDGVSLAVAATPGPPPLMVPLTLIQGAASKGAVCLDGTLPGYHFHPGFGSGANSWLIQLEGGGWCNTIRSCVFRKTTRRGSSKYMEKQLAFTGILSNKAEENPDFFNWNRVIVRYCDGASFSGDSQNEAAQLQFRGQKIWQAAMQELLFKGMQKANQALLSGCSAGGLASIIHCDEFRSLFPTSTKVKCLSDAGFFLDAVDISGGHTLRNLFGGVVKLQEVQKNLPNSCLNQLDPTSCFFPQNLINHVETPLFLLNAAYDAWQVQESLAPHSADPHGSWNDCKSNHARCNSSQIQFLQDFRNQMLNDVKGFSGTSQTGLFINSCFAHCQSERQDTWFADDSPLINNMPIAIAVGDWFFDRKTVKAIDCAYPCDNTCHNLVFNAVKSAVVDYQSTSDDDTPTNTMTMIYSRSTRLTFSSGLYMLSQDLDSAIDTLGLEEPIWLRKNNL 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02113 476 Pfam Pectinacetylesterase 46 391 IPR004963 GO:0016787
Gma19g02113 476 PANTHER PECTIN ACETYLESTERASE 2 427 - -
Gma19g02113 476 PANTHER NOTUM-RELATED 2 427 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02113 Gma-Chr19 50023255 50028834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02113 42 417 Carbohydrate Esterase AT3G62060 72.679 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02113 K19882 - gmx:100785270 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02113 19 50023255 50028834 Gma03g02076 03 46323178 46328825 GST
Gma19g02113 19 50023255 50028834 Gma10g01380 10 40646780 40656346 PCT
Gma19g02113 19 50023255 50028834 Gma02g00060 02 721467 725793 PCT
Gma10g01380 10 40646780 40656346 Gma19g02113 19 50023255 50028834 PCT
Gma02g00060 02 721467 725793 Gma19g02113 19 50023255 50028834 PCT