Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02111 ATGGGAAGGCACTCTTGCTGTTACAAACAGAAACTTAGGAAGGGTCTTTGGTCACCAGAAGAAGATGAAAAACTTCTGAGGCATATTACAAAGTACGGTCATGGATGTTGGAGCTCAGTTCCTAAGCAAGCAGGTTTGCAGAGGTGCGGCAAGAGCTGCAGGCTTAGGTGGATCAATTACTTAAGGCCTGATTTGAAGAGAGGTACATTCTCACAAGAGGAGGAAACTCTCATCATTGAACTTCATGCAGTGCTAGGGAACAGATGGTCTCAAATTGCAGCTCAATTGCCAGGGAGGACCGACAATGAAATAAAGAATCTGTGGAATTCTTGCCTAAAGAAGAAACTGAGGCAAAGAGGAATAGACCCTGTGACACATAAGCCACTGTCAGAGGTTGAGAATGGGGAAGAGGACAAAACAAGAAGCCAAGAGTTATCCAATGAATTGAACCTCCTGAATTCAGAGAGCTTCAAGTCAGATGAAGGGTCCTATGAGCAGAGAGCATCATCATCAATTGCCCCCAAAGCCTATGAGATGGAAGGCTCTTGCAGCTCCAAGATTAACACCACCAAAAATGACACCAACTTGATGTCCAATTGTTCCAACAAAGACATGTTCTTAGACAGCTACACCACTAGTTGCCAACCCTCAGATTTGATGGGAAATTACCCTCTTCAAATCACTGACACTCTCCCAACCAATTCAAACTCTTGCCATTGGTTCAGCCAAACTGCAAGACCCTTTGATATGAACTCTGAGTTTACAATCACTTCCAATGTTATGTCCATTCTTCCACCTACAACAACCTCATTTCTCCCAAGCACTTCTTTTTGCTACAAGCCATCACTTGGTGTCCCTTCAGAAGATATTTCAACAGCATCTTTTGCTTTGAATGGTCCCAATTACTGGGAAGCCAGTGCCTCCAACAACAGCAATGGAAGCAACAACACAAGTGATGGCAGCAGAGAGTTGACAACTACAAGTAGCAAGAACAGTGTACTCTCTTCTTGGGGATTGACAGAAGAAACAAAGTGGTCTGAGTACCTCCAAAACCCAATGCTAATGCTGGCAGCTCCTGAATCATTGTGCAACCAAATTAGGCCAGCCACACATTTGGTACCTGATAACACTTTAGGGTCAATAATAGTGCCTGATTCCAAGGAGCAACAACAACAACAACAATCTCAAAATTCTAGCATCTTCTCCAAGGACATGCAGAAGCTAACAGCAGCCTTTGGACATATATAG 1248 0.4367 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEETLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPVTHKPLSEVENGEEDKTRSQELSNELNLLNSESFKSDEGSYEQRASSSIAPKAYEMEGSCSSKINTTKNDTNLMSNCSNKDMFLDSYTTSCQPSDLMGNYPLQITDTLPTNSNSCHWFSQTARPFDMNSEFTITSNVMSILPPTTTSFLPSTSFCYKPSLGVPSEDISTASFALNGPNYWEASASNNSNGSNNTSDGSRELTTTSSKNSVLSSWGLTEETKWSEYLQNPMLMLAAPESLCNQIRPATHLVPDNTLGSIIVPDSKEQQQQQQSQNSSIFSKDMQKLTAAFGHI 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02111 415 MobiDBLite consensus disorder prediction 122 144 - -
Gma19g02111 415 SMART sant 13 63 IPR001005 -
Gma19g02111 415 SMART sant 66 114 IPR001005 -
Gma19g02111 415 MobiDBLite consensus disorder prediction 122 171 - -
Gma19g02111 415 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Gma19g02111 415 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gma19g02111 415 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gma19g02111 415 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gma19g02111 415 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Gma19g02111 415 PANTHER HOMEODOMAIN-RELATED 1 409 - -
Gma19g02111 415 CDD SANT 17 61 IPR001005 -
Gma19g02111 415 Gene3D - 68 145 - -
Gma19g02111 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gma19g02111 415 PANTHER MYB DOMAIN PROTEIN 55 1 409 - -
Gma19g02111 415 MobiDBLite consensus disorder prediction 306 327 - -
Gma19g02111 415 MobiDBLite consensus disorder prediction 145 170 - -
Gma19g02111 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gma19g02111 415 Gene3D - 11 67 - -
Gma19g02111 415 CDD SANT 69 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02111 Gma-Chr19 50002787 50004533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02111 1 156 MYB Transcription Factor Family AT4G01680 84.615 2.51e-96 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma19g02111 Myb_DNA-binding 1.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02111 K09422 - gmx:100037467 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02111 19 50002787 50004533 Gma03g02074 03 46300639 46302596 GST
Gma19g02111 19 50002787 50004533 Gma10g01379 10 40636448 40638184 PCT
Gma19g02111 19 50002787 50004533 Gma02g00062 02 733767 735765 PCT
Gma10g01379 10 40636448 40638184 Gma19g02111 19 50002787 50004533 PCT
Gma02g00062 02 733767 735765 Gma19g02111 19 50002787 50004533 PCT