Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02106 ATGGACAACCCACACCACCGTCAATTGACCTTCTTCCTCAGCCATAGTATAGATCACACAGATCCTCCTTCTGTCAAAGAAATGGATTTCTTCTCAACTTCATCGGCACCTGATCATAAAAATAACACTAGTAGCAGTGATACCAATGATGATTATCAGAAGCGTGATGATCAACATGACACTCATGATCGCCATGGAAGCATCACCGCCGATGGATCACCAACACGCGCCACTGACCACCATGTAAACACTGGACTGAATTTAACTTGTGCAAGTGCTGGAATGAAAAAAGCAGACAATAGTGAAAATCCTGAAACTGAGCTGAGTTCTCTTGAAAACCAATTGGGGAAACTACAAGAAGAGAATAGCAAGTTAAGAAGTGTGCTGGACCAGATAACCAAAAACTATGCCCAACTACAAGCTCAGTTGTTCAACGCCTTGCAAAAACAAAAGCTTCCTAAGGCGAGAGCAAGCACGAAATTAGACGTGGTCAATAATGCATCGGTTTCGGATGAAAAGACTGATCAAGATGTATCGGTTTATCGTTCAAACAACGCGGAGGTAATGTCAAAAACACATGATCATGATGACGACCCTCAATTGACTAAACTGAATCTTGGAAAGCAGGCTTGTCCTGATGCTGCAGAAGATGTTCTTGACCGGTCCTCTTCACAGAGTTGGGGATCATCCAAGTTAGAGGAACAACCCAAAACTGCAGAACAACTTCCTGCAGAACAGATTCCTCTCAGAAAAGCCAGGGTTTCCGTCCGTGCTAGATCAGAAGCTCCCATGATAAGCGATGGATGTCAGTGGAGGAAATATGGACAAAAAATGGCCAAGGGTAACCCTTGCCCTCGTGCTTACTATCGCTGCACTATGGCTGTAGGATGCCCGGTCCGAAAACAGGTTCAAAGATGTGCAGATGACAAAGCAGTGTTGATAACAACCTACGAAGGCAATCACAACCACCCTTTGCCGCCGGCCGCCACCGCCATGGCAAATACTACGTCAGCAGCCGCAGCCATGCTGCTATCAGGTTCGGCAGCCCCAAGCAAGGAAGCGCTAACAAACTCTGCAGGATATTACTCTTCTTCTTCAATTCCCTATGCTTCAATGGCAACCCTATCAGCTTCAGCTCCATTCCCAACCATCACTCTCGACTTGACCCAAAACCCCAACAACGCCATGCAGCTGCACCGAGTACCAGCAGGCCATGGCGCCACGTTCTCTCTGCCACTGCATGCGGCAGCTGCTGGTCCCCACCTACTAGGTCACCCCTTGTTCTTCCAACAGAAGCTTCCACCGGCAGCATTAATGCCCCTTCTTCAACGACAACCTTCGTCGTCGATGGTCGAAACGGTTAGTGCAGCCATTGCTTCGGATCCGAACTTCACTGCAGCTTTGATGGCAGCAATCTCATCAATCATTGGAGTACCAAGAAGCAGTGATGATAATAACAATGGAAATGGTGCTATTCCAGGGTCACCACAGCTTCCTCAGTCATGCACTACTTTCTCCACCAACTAG 1527 0.4754 MDNPHHRQLTFFLSHSIDHTDPPSVKEMDFFSTSSAPDHKNNTSSSDTNDDYQKRDDQHDTHDRHGSITADGSPTRATDHHVNTGLNLTCASAGMKKADNSENPETELSSLENQLGKLQEENSKLRSVLDQITKNYAQLQAQLFNALQKQKLPKARASTKLDVVNNASVSDEKTDQDVSVYRSNNAEVMSKTHDHDDDPQLTKLNLGKQACPDAAEDVLDRSSSQSWGSSKLEEQPKTAEQLPAEQIPLRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCADDKAVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSAAPSKEALTNSAGYYSSSSIPYASMATLSASAPFPTITLDLTQNPNNAMQLHRVPAGHGATFSLPLHAAAAGPHLLGHPLFFQQKLPPAALMPLLQRQPSSSMVETVSAAIASDPNFTAALMAAISSIIGVPRSSDDNNNGNGAIPGSPQLPQSCTTFSTN 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02106 508 SMART WRKY_cls 265 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma19g02106 508 MobiDBLite consensus disorder prediction 16 81 - -
Gma19g02106 508 MobiDBLite consensus disorder prediction 219 236 - -
Gma19g02106 508 SUPERFAMILY WRKY DNA-binding domain 258 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma19g02106 508 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 21 508 - -
Gma19g02106 508 MobiDBLite consensus disorder prediction 27 48 - -
Gma19g02106 508 Pfam WRKY DNA -binding domain 267 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma19g02106 508 Gene3D WRKY domain 250 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma19g02106 508 ProSiteProfiles WRKY domain profile. 260 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma19g02106 508 Coils Coil 101 149 - -
Gma19g02106 508 MobiDBLite consensus disorder prediction 213 245 - -
Gma19g02106 508 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 21 508 IPR044810 GO:0003700
Gma19g02106 508 MobiDBLite consensus disorder prediction 49 69 - -
Gma19g02106 508 MobiDBLite consensus disorder prediction 481 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02106 Gma-Chr19 49913147 49917653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02106 107 476 WRKY Transcription Factor Family AT4G04450 44.500 1.60e-88 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma19g02106 WRKY 3.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02106 - - gmx:100783661 964.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02106 19 49913147 49917653 Gma03g02070 03 46239635 46243933 GST
Gma19g02106 19 49913147 49917653 Gma10g01372 10 40526044 40530492 PCT
Gma19g02106 19 49913147 49917653 Gma02g00068 02 798178 802059 PCT
Gma10g01372 10 40526044 40530492 Gma19g02106 19 49913147 49917653 PCT
Gma02g00068 02 798178 802059 Gma19g02106 19 49913147 49917653 PCT