Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02101 ATGGCAATGTCCGTGATAAGAACAAAAGGAGGCCTAGTTAAGCCAGCAGAGGAGACTCCCTTGAGCACAGTTCTGGACCTATCAGCCATCGATAGATTACCTGTTCTAAGATGCAATGCGAGAACCTTGCACGTGTTCAAACACGGTGGTCCTGAAGCGCCAAGGGTCATAAGAGAGGCCTTGTCCAAAGCACTGGTTCCGTATTACCCTCTTGCAGGAAGACTCAAAGAATCCAAACCAGGGTGCCTTCAAATTGAATGCTCTGGTGACGGCGTGTGGTATGTTCAAGCATCTTCTGATTCCACCCTTCACTCTGTCAATTTCTTTGATGATGTTCACTCTATTCCTTATGATCATCTTCTTCCTGATGCTATTCCTGAGACCCAATGCATCGACCCCCTCGTGCAAATGCAGGTAACACAATTTGGTTGCGGGGGTTTCGTGATAGGCCTCATATTCTGCCATAGCATATGCGATGGTCTTGGTGCTGCACAGTTTCTAAATGCAATCGGGGAACTAGCAAGGGGACTCGAAAAACTCAGCATTGAGCCAGTGTGGAACAGAGACTTCTTTCCATCTCCTCAAACACCCCAAGAAACTGCATTGCCACCAACACCACCTACAATGCCAGATTACAAGCTAGAACCTGCCAACATAGATATGCCCATGGATCGAATCAACAGTGTGAAGCGAGAATTTCAACTAGCAACTGGACTCAATTGCTCAGCCTTCGAGATTGTAGCTGCAGCATGTTGGACCACTAGAACAAAGGCCATTGATCAATTCGAGGCCAACACTGAATTGAAGTTAGTGTTCTTTGCAAATTGTCGCCACCTCTTGGACCCTCCCCTACCCAATGGTTTCTACGGCAATTGTTTCTTCCCAGTGACAATCACAGCTTCGTGTGAGTCACTTAGAAATGCTACAATTGTTGGTGTGGTGAAGCTGATAAAAGAAGCCAAGGCCAAGTTGCCCGTGGAATTTGACAAGTACTTGAAGGGTGAGCATTTGAAAAACGGAGAGGACCCTTTTGCGCCTCCGCTCACATACACCACTCTCTTTGTATCTGAGTGGGGGAAGTTGGGATTCAACCACGTGGACTACCTGTGGGGCCCACCCGTCCACGTGGTTCCCATTCAAGGATCCAGCATCATACCTGTGGCCATTGTGGGGTCCCTGCCCCTTCCCAACAGAGGGATTCGTTTGATGACGTGGTGCGTGGAGGAGGCACATCGCCTTCCTTTTCTTCATCACATGCATGGTGTCGTGAATCATGTAAGCGGAAGAATAATTAAATGA 1299 0.4804 MAMSVIRTKGGLVKPAEETPLSTVLDLSAIDRLPVLRCNARTLHVFKHGGPEAPRVIREALSKALVPYYPLAGRLKESKPGCLQIECSGDGVWYVQASSDSTLHSVNFFDDVHSIPYDHLLPDAIPETQCIDPLVQMQVTQFGCGGFVIGLIFCHSICDGLGAAQFLNAIGELARGLEKLSIEPVWNRDFFPSPQTPQETALPPTPPTMPDYKLEPANIDMPMDRINSVKREFQLATGLNCSAFEIVAAACWTTRTKAIDQFEANTELKLVFFANCRHLLDPPLPNGFYGNCFFPVTITASCESLRNATIVGVVKLIKEAKAKLPVEFDKYLKGEHLKNGEDPFAPPLTYTTLFVSEWGKLGFNHVDYLWGPPVHVVPIQGSSIIPVAIVGSLPLPNRGIRLMTWCVEEAHRLPFLHHMHGVVNHVSGRIIK 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02101 432 PANTHER ACYL TRANSFERASE 4 1 421 - -
Gma19g02101 432 PANTHER ACYL TRANSFERASE 4 1 421 - -
Gma19g02101 432 Gene3D - 213 410 IPR023213 -
Gma19g02101 432 Gene3D - 2 204 IPR023213 -
Gma19g02101 432 Pfam Transferase family 5 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02101 Gma-Chr19 49868520 49870655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02101 12 385 Monolignol Biosynthesis Gene Families AT5G48930 28.960 1.85e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02101 - - gmx:100783128 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02101 19 49868520 49870655 Gma03g02064 03 46174225 46178500 GST