Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02100 ATGTTCTCTTTCCTTCTTTTGTTTTCTGCCATGGAAGACGAGCCATTTCTCACTACCACTTCCCAACCCATCGCCGATTGCCTTCTTCCATCTTCCAAGTCCTTCAACGACGTCACCACCACACGCGCGCGTGACGTCGCCGCCGCCGCCGCCGAGGAGATTCAATCCGAACAACAACAACCTCCCAAGAAGAAAAAACTGAGCCGCTGCAAGACGGCACCTGCGATGGTCACCATGCGAGACCTCAAACCTAAGACACCCCAACTCCCCAAACCTCAATCAAGTTCCATAATTCGACAAGGCATGTGGTTACTCGCCGTGTACCTCTCCATAGGAGTAGTCATATACTCCTTCAACAGGGACCGTTTTTCCGGCATCGAAACACACCCTGTGGTCGACGCACTCTACTTTTGTATAGTCACCATGTGTACCATAGGTTACGGAGACATAGCGCCGTTAACCCCATTCACCAAAATCTTCGCTTGCGCTTTTGTGTTGGTGGGGTTTGGGTTCATAGACATACTCCTCAGCGGGCTCGTGAACTTCGTATTGGATTTGCAAGAGAACATGATCCTAACGGGTCTGCAAATGGGTGCGAGTGAAAGGGAAGGTTTTTCTGCTCGGAATTACATCGTTGATGTGGCGAAGGGAAGGATGAGGATCAGGTTGAAGGTTGGTTTGGCGCTTGGGGTTGTGGTGATGTGTATTGGGATTGGGAGTTTGGTGTTGTACTTTGTGGAAGGGTTGGATTGGGTTGATTCGATTTACTTGTCGGTTATGTCTGTCACAACGGTTGGGTATGGGGACCGAGCCTTTAAGACGCTTCCTGGTCGTTTGTTTGCGGCTATTTGGTTGCTCTTTTCTACTCTCATGGTGGCTCGGGCTTTTCTCTATTTGGCTGAGGCTAGAATCGATAGAAGGCATCGGAGAATGGCTAAGAAGGTTTTGCATAGGGAAATTACCGTCCAGGATTTGCTTGCTGCTGATATCAACAACACTGGTTTCATTAGcaagtcagagtatCGTGACTTGTCTCCCAGCTGCCACAAGCTATGTGTCTGCATTAGGAGACCCAGGAATGCAGACAAATGGACTGATCGAGGGTGGCCTTTGAAGCATGGAACTTTTGCAATGAGGTTGGCCAAGAAGCTCCTCTTATGGGTAGCCCAAGAGCTGCTGATTGTTTTGATCTTTCAAGTTCAGGTTCAGTGCAACACAAGGTCACAGAAGCTGATAAAAAACTTGGAGTCATTTCATGGTCTGGGACCAGGAGATATAAAAAACACAGATCTTTATGCAGTTCAAAAGGAACTGTATCTGGGTTCTTTATGTCAAGTTGAAGACACCCCATCCCTAAAGCCTTGGCAATTTTGGATGGTAATGATGAAAAATGGCAACTATGACACAATGTCTGGTTTATGCCCTAAGGACGGGGAAAAGACACAGCTCAATGATTCCATAATGCAAGGAGGATTCTATGGTACTTATGATTTGGATTCTGATTGTGAGGGTAGTGGAAATGGTAATCACTCTTATTACGAGGTAGCTTGGGAGAAGAAAGTTAATGTGGGAAGTTGGGTGTTCAAACATAAGCTCAAGACTTCAAACAAGTATCCACGGTTGATATTGTACCTGAGAGCTGATGCAACCAGAGGATTTTCTGGAGGTTACCATTATGACACAAGAGGAATGCTTAAAACCCTTCCAGAGTCACCAAATTTTAGAGTCAGGTTGAGATTAGATATAAAAAAAGGAGGAGGACCTAAGAGCCAGTTCTACCTTTTAGACATGAGTAGCTGCTGGAAGAACAATGGTGCTCCTTGTGATGGAGATGTGCTAACTGATGTCACTAGATATGGTGAGATGATCATTAATCCTAAAACACCAGCTTGGTGCAGCCCCACAGATTTGGGGAACTGTCCACCATTTCATATCACTCCAGATAACAGGAAAATTTATCGAAATGACACCGAAAATTTCCCAAACACTTGGAGCAATCCTCAGGCACAAGAGATTGTTCAGTTATTGCCTCACCCTATATGGGGTGCTTATGTAGGAGATGGTTGGGTTGGGGATCCAAGGACTTGGGAACTTGATGTTGGTGGACTCTCCAGTAGACTCTACTTCTATCAGGATCCTGGCACTCCTCCTGCTAAAAGAATATGGACTTCTATTGATACTGGAACTGAGATATTTGTTAGTGCACAAGATGAAGTAGCAGAGTGGACTCTGAGTGACTTCGATGTCATTCTAACAGCCAGAGTCAGAATTCAAAAACTAGTTTGGAAGTATTAG 2295 0.4536 MFSFLLLFSAMEDEPFLTTTSQPIADCLLPSSKSFNDVTTTRARDVAAAAAEEIQSEQQQPPKKKKLSRCKTAPAMVTMRDLKPKTPQLPKPQSSSIIRQGMWLLAVYLSIGVVIYSFNRDRFSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPFTKIFACAFVLVGFGFIDILLSGLVNFVLDLQENMILTGLQMGASEREGFSARNYIVDVAKGRMRIRLKVGLALGVVVMCIGIGSLVLYFVEGLDWVDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLFSTLMVARAFLYLAEARIDRRHRRMAKKVLHREITVQDLLAADINNTGFISKSEYRDLSPSCHKLCVCIRRPRNADKWTDRGWPLKHGTFAMRLAKKLLLWVAQELLIVLIFQVQVQCNTRSQKLIKNLESFHGLGPGDIKNTDLYAVQKELYLGSLCQVEDTPSLKPWQFWMVMMKNGNYDTMSGLCPKDGEKTQLNDSIMQGGFYGTYDLDSDCEGSGNGNHSYYEVAWEKKVNVGSWVFKHKLKTSNKYPRLILYLRADATRGFSGGYHYDTRGMLKTLPESPNFRVRLRLDIKKGGGPKSQFYLLDMSSCWKNNGAPCDGDVLTDVTRYGEMIINPKTPAWCSPTDLGNCPPFHITPDNRKIYRNDTENFPNTWSNPQAQEIVQLLPHPIWGAYVGDGWVGDPRTWELDVGGLSSRLYFYQDPGTPPAKRIWTSIDTGTEIFVSAQDEVAEWTLSDFDVILTARVRIQKLVWKY 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02100 764 PANTHER - 663 752 - -
Gma19g02100 764 PANTHER - 412 481 - -
Gma19g02100 764 ProSitePatterns EF-hand calcium-binding domain. 329 341 IPR018247 -
Gma19g02100 764 SUPERFAMILY Voltage-gated potassium channels 216 324 - -
Gma19g02100 764 Pfam Ion channel 104 183 IPR013099 -
Gma19g02100 764 Pfam Ion channel 232 300 IPR013099 -
Gma19g02100 764 PANTHER PROTEIN, PUTATIVE ISOFORM 1-RELATED 412 481 - -
Gma19g02100 764 SUPERFAMILY Voltage-gated potassium channels 98 188 - -
Gma19g02100 764 PRINTS Two pore domain K+ channel signature 263 272 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gma19g02100 764 PRINTS Two pore domain K+ channel signature 140 168 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gma19g02100 764 PANTHER PROTEIN, PUTATIVE ISOFORM 1-RELATED 663 752 - -
Gma19g02100 764 PANTHER PROTEIN, PUTATIVE ISOFORM 1-RELATED 481 662 - -
Gma19g02100 764 Gene3D - 79 197 - -
Gma19g02100 764 Gene3D - 208 328 - -
Gma19g02100 764 PANTHER - 481 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02100 Gma-Chr19 49851624 49860193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02100 63 341 Ion Channels AT4G01840 71.228 2.00e-135 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02100 - K05389 gmx:100780438 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02100 19 49851624 49860193 Gma03g02063 03 46167040 46171158 GST