Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02095 ATGAGTTGCTTCGGCTGTTGTGAGGAAGATGACTACCAGAAGACTGCTGAAAGTGGAGGACAGCATGTGGTAAAAAACTCAACAGGAAATGATGGAAACAGTCGTGCATCCGAAACTGCAAAGCAGGGGACTCAAGCTGTTAAAATTCAGCCCATTGAAGTTCCTGAATTACAAGTGGATGAACTCAAAGAAATCACCGATGGCTTTGGAGAAAGTTCTTTGATTGGAGAGGGATCCTATGGAAGAGTATATTATGGTGTTCTTAAAAGTGGGCAGGCTGCGGCAATCAAGAAATTAGATGCCAGTAAACAGCCTGATGACGAATTTTTAGCCCAGGTTTCAATGGTTTCACGGCTGAAGCATGACAATTTTGTTCAATTGCTTGGTTATTGCATTGATGGAAACTCCCGAGTTCTTGCTTATGAGTTTGCATCTAATGGGTCTCTTCATGATATTTTACATGGCAGAAAAGGAGTTAAAGGAGCACAGCCTGGTCCTGTTCTAACATGGACTCAGAGAGTTAAAATTGCTGTAGGGGCTGCCAAAGGGCTTGAGTACCTGCATGAGAGGGCTGATCCCCACATTATCCACCGGGACATCAAGTCAAGCAATGTACTAATCTTTGATGACGATGTTGCTAAAATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGACATGGCAGCACGTCTCCATTCCACCCGTGTCCTTGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACTGGCCAATTGAATGCCAAGAGTGATGTATACAGCTTTGGTGTTGTCCTTCTGGAACTTTTGACTGGAAGGAAGCCTGTTGATCATACACTACCACGTGGGCAGCAGAGCCTGGTTACTTGGGCTACACCAAGACTCAGTGAGGATAAAGTCAGACAGTGTGTAGATGCAAGACTAGGAGGAGAATACCCACCCAAAGCTGTTGCTAAGATGGCCGCTGTTGCTGCCCTGTGCGTGCAATATGAAGCTGATTTCAGACCAAACATGAGCATTGTAGTCAAAGCTCTTCAACCTTTATTGAATGCAAGACATGGGCCTGCTGGTGAAACTCCAAACTAA 1086 0.4466 MSCFGCCEEDDYQKTAESGGQHVVKNSTGNDGNSRASETAKQGTQAVKIQPIEVPELQVDELKEITDGFGESSLIGEGSYGRVYYGVLKSGQAAAIKKLDASKQPDDEFLAQVSMVSRLKHDNFVQLLGYCIDGNSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLTWTQRVKIAVGAAKGLEYLHERADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVRQCVDARLGGEYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLNARHGPAGETPN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02095 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Gma19g02095 361 PIRSF ILK 9 353 - -
Gma19g02095 361 CDD STKc_IRAK 75 348 - -
Gma19g02095 361 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g02095 361 Gene3D Transferase(Phosphotransferase) domain 1 144 355 - -
Gma19g02095 361 Gene3D Phosphorylase Kinase; domain 1 29 143 - -
Gma19g02095 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 359 - -
Gma19g02095 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 359 - -
Gma19g02095 361 SMART serkin_6 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g02095 361 SUPERFAMILY Protein kinase-like (PK-like) 48 345 IPR011009 -
Gma19g02095 361 MobiDBLite consensus disorder prediction 19 45 - -
Gma19g02095 361 Pfam Protein tyrosine and serine/threonine kinase 74 345 IPR001245 GO:0004672|GO:0006468
Gma19g02095 361 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Gma19g02095 361 MobiDBLite consensus disorder prediction 17 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02095 Gma-Chr19 49814205 49817876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02095 48 352 Receptor kinase-like Gene Family AT3G58690 49.355 3.05e-92 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Gma19g02095 PK_Tyr_Ser-Thr 6.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02095 K13436 - gmx:100499642 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02095 19 49814205 49817876 Gma19g02095 19 49814205 49817876 ECH
Gma19g02095 19 49814205 49817876 Gma10g00089 10 895089 899480 PCT
Gma19g02095 19 49814205 49817876 Gma02g00081 02 880658 883097 PCT
Gma10g00089 10 895089 899480 Gma19g02095 19 49814205 49817876 PCT
Gma02g00081 02 880658 883097 Gma19g02095 19 49814205 49817876 PCT