Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02092 ATGGACGACTGTTGTGCCGTTTGTGCTGAGCCTTTGGAATGGGTTGCGTACGGACCCTGCTTGCACCGGGAGGTGTGTTCCACGTGCGTCGCTCGTCTCCGTTTCATCTGCGACGATCGCCTTTGCTGCATCTGCAAGACCGAATGCAACCTTGTTTTCGCCACCAAGGCTCTAGGTGATTATACAAGGATGATCAATGATTTTTTGACCCTTCCTTCAGAGGTGAGGGAGGGCAAGGTTGGATCATATTGGTACCATGAGGATACAAATACATTTTTTGATGATATGGACCATTACAGGATGATCAAGGCTATGTGCAGACTTTCATGCAGTGTATGTGACAAGATTGAGGATCAACCACAGGATGCTGCATCAAGGCGGCGAGCGAAGTTTAGGAATATAGGGCAGTTGAAGGGTCATTTATTCCACCGTCATAAGTTGCATATGTGCAATTTGTGTTTAGAAGGAAGGAAGGTTTTTATATGTGAGCAAAAACTATATACCAAAGCACAGTTGAATCAACACATAATCTCAGGTGATTCTGAGGTGGATGGAAGTGAGAGTGAGAGAGGCGGTTTCATGGGGCATCCCATGTGTGAATTCTGTAGAACCCCATTTTATGGAGACAATGAATTATACATGCATATGTCTACAGAACATTATACTTGTCATATATGCCAAAGGCAGCATCCAGGGCAGTATGAGTACTATAAGAATTATGATGACCTAGAGATCCACTTCCGTCAAGAGCACTTCTTATGTGAAGATGAGGCTTGCCTTACTAAGAAGTTTGTTGTTTTTCAATCTGAAGCAGAGATGAAGAGGCATAATGCTATTGAACATGGAGGGCGGATGTCACGGTCCAAGCGTAATGCTGCTCTTCAGATACCAACTAGCTTCCGATACAGACATGGTAATGAACATGAGCAACGCCGTGGAAGAGGTCGTACGTTTCGTCGTGATACTGAAAATCAACTTTCTATGGCCATTGAAGCTAGTTTGGAAACAGCTAATGCAGAGCGAACATTTCGTGATCAATCGACATCAAGTATTGGGCAAATTGCTGTTGATGATGGGAATGATGATATTGATTCTCTCATTCAGCCATTTGAATCATTAGCTGCTGGAGGTTCTGAATCATCTGCAAGATACCTTCAAGCCTTGGGCCATAGCTCTAGAAATGGGCCTCTGGAAGATTCTTCCTTTCCACCTCTACCCATAACTTCCAGCAATGGCCAGCAAAGGTCCAAACATGAACTGGAAGGTTCATCTAGTAACACTATGGCTGCACGTCTGCGTCGGCATGGCAACAGAACTGTATCCGTTGTCAATTCTGGTAATGCTTGGCCAGCAGCAGGCCGTGGACTGGTACAAACATCAAGTAATCCTTCACAATCTAAACCGTCAACAAATAATGTTCTTGGACTGTCTCGTAACACTGGGCAGATGAAAACAGTAATTAACAGTGGACCTTCATCATCAACTTATGCAGGTTCTATTCAGGCTACACAAAGAACTACTCACGGACAATTACCTGCTGGTTCATCGAGGAACACACGTGACAATGTCAGAATTGTTCACTCTGCATCTGCTCCAAATCTCATGGAGAACAACTCTGTTGAAGTTTCAATTTCTGATTTTCCTCCAGTTTCTGCTGCACAAGTGAGTAAGTTACCTGCCAGCAGCCAGTCTAAATTAAACGTGGAAAATTTTCAATCTGCTAACAAGTCTTTGGTTGAAAAGATTCGTGGTGCTCTTGATTTTGATGAAGAAAGATACAGTATATTTAAAGACATATCTGCCCAATATCGCCAAGGCACAATAGATACAGGTACATATGTGGACTATGTGCAGCAGTTTGGCTTGTCTCATCTTGTGCTTGAGTTGGCAAGACTATGCCCAGATACTCAGAAACAAAAAGAGCTTATTGAGGCTCACAACGCTAGTTTGCAAAGAGATGCTTTCCCAGAAATTAACATAGTTCGAGGCACTGCTAGCACCCATCACAAAGACGGTAATGTAAACAAGAAAGGTAAAGGTAAGTCTGTAGATAGTAGGGGGAGTAACTCCACAGAGAAATTAGCAGATAGCTTTTTAAGCACTGTACATCAGCTACAGGCAAATTATAAATCTTCAGAAGATAAAGTGGAGGTGCTATCAAGGGGTGATTACCGCACTGACAGGGGCAAATTAAAAATCAAGCAGCAGATTGATTCAAATCCTGGTAGTCAACCTACAATGAAGCTTGGTGGGCAGACTGAAACATCAAATGGCAGTTTATCCGATCAAAGTAAAGAGGATGGGGGTGGTGGGAACAAGCAACGCAAGAAAACTTCAAAGTTCCTGAGAGTGCGCCTTGGTGATGGTTCTGTTTCATCCCTTCTTGATCAATCAGATCCTGGAACAACAGACAGCTCAGAAGGTAACAATGATGACGTTGGAGGAGGGCCTCCTGTGCGAGGTGTTTGGCGAAAAGGGGGAGGTCATAAACTTTTTCCCTAG 2502 0.4361 MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICDDRLCCICKTECNLVFATKALGDYTRMINDFLTLPSEVREGKVGSYWYHEDTNTFFDDMDHYRMIKAMCRLSCSVCDKIEDQPQDAASRRRAKFRNIGQLKGHLFHRHKLHMCNLCLEGRKVFICEQKLYTKAQLNQHIISGDSEVDGSESERGGFMGHPMCEFCRTPFYGDNELYMHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRQEHFLCEDEACLTKKFVVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPTSFRYRHGNEHEQRRGRGRTFRRDTENQLSMAIEASLETANAERTFRDQSTSSIGQIAVDDGNDDIDSLIQPFESLAAGGSESSARYLQALGHSSRNGPLEDSSFPPLPITSSNGQQRSKHELEGSSSNTMAARLRRHGNRTVSVVNSGNAWPAAGRGLVQTSSNPSQSKPSTNNVLGLSRNTGQMKTVINSGPSSSTYAGSIQATQRTTHGQLPAGSSRNTRDNVRIVHSASAPNLMENNSVEVSISDFPPVSAAQVSKLPASSQSKLNVENFQSANKSLVEKIRGALDFDEERYSIFKDISAQYRQGTIDTGTYVDYVQQFGLSHLVLELARLCPDTQKQKELIEAHNASLQRDAFPEINIVRGTASTHHKDGNVNKKGKGKSVDSRGSNSTEKLADSFLSTVHQLQANYKSSEDKVEVLSRGDYRTDRGKLKIKQQIDSNPGSQPTMKLGGQTETSNGSLSDQSKEDGGGGNKQRKKTSKFLRVRLGDGSVSSLLDQSDPGTTDSSEGNNDDVGGGPPVRGVWRKGGGHKLFP 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02092 833 MobiDBLite consensus disorder prediction 736 767 - -
Gma19g02092 833 SMART c2h2final6 252 281 IPR013087 -
Gma19g02092 833 SMART c2h2final6 108 145 IPR013087 -
Gma19g02092 833 SMART c2h2final6 221 251 IPR013087 -
Gma19g02092 833 SMART c2h2final6 197 220 IPR013087 -
Gma19g02092 833 MobiDBLite consensus disorder prediction 456 478 - -
Gma19g02092 833 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Gma19g02092 833 MobiDBLite consensus disorder prediction 663 689 - -
Gma19g02092 833 MobiDBLite consensus disorder prediction 405 425 - -
Gma19g02092 833 CDD RING-HC_ZNF598 5 46 IPR041888 -
Gma19g02092 833 MobiDBLite consensus disorder prediction 492 522 - -
Gma19g02092 833 MobiDBLite consensus disorder prediction 669 683 - -
Gma19g02092 833 PANTHER ZINC FINGER PROTEIN 598 1 831 IPR044288 GO:0061630|GO:0072344
Gma19g02092 833 MobiDBLite consensus disorder prediction 727 833 - -
Gma19g02092 833 MobiDBLite consensus disorder prediction 791 810 - -
Gma19g02092 833 PANTHER EBR1 1 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02092 Gma-Chr19 49783693 49788281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02092 1 832 C2H2 Transcription Factor Family AT3G62240 51.572 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02092 K22381 - gmx:100780426 1647.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02092 19 49783693 49788281 Gma19g02092 19 49783693 49788281 ECH
Gma19g02092 19 49783693 49788281 Gma03g02053 03 46104341 46110225 GST