Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02077 ATGGACGCGAAGGATATCCTGGGATTGCCCAAAAACTCATTCCCAACTCTCGAGAAGAAGTCTCGTCCTCCCAAAGAGTCTCAAAGAAAACCAGATGGCATTTCACGCGAGGTGTATGCGCTTACGGGTGGATTGGCCCCTCTCATGCCTGCAACTGAAGCCTCTCAGTTGAAGAAAAAGCCTCCTCCTCTGGAAAAGATCACTTGGCAGTGGCTTCCTTTCACCAGTTCTGCTCGTAAAGATAATCTTCATCTTTACCATTGGGTACGAGTCGTTAATGGTGTTCCTCCCACAGGGGACTATTCTTTTGCCAAGTATAACAAGTCCGTTGATGTTATCAAATACACAGATGAGGAGTATGACAAGTATTTGACAGATCCTATGTGGACCAAAGAGGAGACGGATCAACTATTTGACTTATGTGAGAGATTTGATCTCCGATTTATTGTAATAGCTGATAGGTTTCCATCCTCTCGGACTGTAGAGGAATTAAAGGATAGATATTATAGTGTTTCCCGGGCTATATTGATTGCTAGGGCTCCATCTTCTGGGGATGTCGCAGCACATCCTATTGTTAAGGAAACATATAATTTTGCACAAGAAATGGAACGAAAACGAGCACTGTCCATGGTCCTCTCTCAAACAAGGCAACAAGAACGAAGAGATGAAGAGGTTCTTGTTGAAGCAAAAAAAATAGCGGAAAAACGCCTACCTCCCAAGGTTGCTGAACAGTCTCAGTTGGTTGCTTCTAATGCTGGTGCAGAAGCTACAGAGAGGGCTGTCCCTGGTGAAACCATATCTCCATCAAATGTGCAAATTCCAATGGCTGTTCCAGATAATGCATCTACTCTAGCTTCTCTTCGTATGCTTCGTGTATATTTGAGAACATATGCACTTGAGCAAATGGTGCAAGCTGCGAACGCATCTGCTGGACTTCGGACTATCAAACGGGTTGAACAAACTTTGCAAGATCTTGGGGTCAATTTGAAGCCAAGGGTTCCAACGAAAGCTGTTTGTGCAGAGCATCTTGAATTAAGAAAAGAAATACTAACTTGGCTTAATCTCCAGAAGCAGGTGCAATATAAAGAGGCTGAAGGTTCCTCTTTTCGTGATGGGTCATATGGTGAAACACCTGGAACACCAAAGCATTTACATCGTGTTGGGGATCAGGACCGAACATTTGTTCCAGATTCAACGAATTTCGGAGTGGAAAGGGTTGGCAAAAAGGACCAAAAGCGCAAGGCACCTGGAGCTCCATCAGCTCATAAAAGACCTAGAAAACTAAAGGCCTCAGATCTTTAG 1302 0.4409 MDAKDILGLPKNSFPTLEKKSRPPKESQRKPDGISREVYALTGGLAPLMPATEASQLKKKPPPLEKITWQWLPFTSSARKDNLHLYHWVRVVNGVPPTGDYSFAKYNKSVDVIKYTDEEYDKYLTDPMWTKEETDQLFDLCERFDLRFIVIADRFPSSRTVEELKDRYYSVSRAILIARAPSSGDVAAHPIVKETYNFAQEMERKRALSMVLSQTRQQERRDEEVLVEAKKIAEKRLPPKVAEQSQLVASNAGAEATERAVPGETISPSNVQIPMAVPDNASTLASLRMLRVYLRTYALEQMVQAANASAGLRTIKRVEQTLQDLGVNLKPRVPTKAVCAEHLELRKEILTWLNLQKQVQYKEAEGSSFRDGSYGETPGTPKHLHRVGDQDRTFVPDSTNFGVERVGKKDQKRKAPGAPSAHKRPRKLKASDL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02077 433 MobiDBLite consensus disorder prediction 18 33 - -
Gma19g02077 433 PANTHER BNAA04G26950D PROTEIN 2 433 - -
Gma19g02077 433 MobiDBLite consensus disorder prediction 403 417 - -
Gma19g02077 433 CDD SANT_DMAP1_like 129 171 - -
Gma19g02077 433 SMART sant 125 174 IPR001005 -
Gma19g02077 433 Gene3D - 98 184 - -
Gma19g02077 433 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 2 433 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Gma19g02077 433 SUPERFAMILY Homeodomain-like 125 174 IPR009057 -
Gma19g02077 433 MobiDBLite consensus disorder prediction 366 433 - -
Gma19g02077 433 MobiDBLite consensus disorder prediction 1 34 - -
Gma19g02077 433 Pfam SANT/Myb-like domain of DAMP1 101 175 IPR032563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02077 Gma-Chr19 49666536 49673124 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma19g02077 SANT_DAMP1_like 7e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02077 K11324 - gmx:100818926 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02077 19 49666536 49673124 Gma19g02077 19 49666536 49673124 ECH
Gma19g02077 19 49666536 49673124 Gma03g02040 03 45978964 45985558 GST