Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02070 ATGGAGAATAATAAGATGATGGGTGTGAAGAAAGAGGACTATGCTGCCAATATAGGATCTTCATCCCTCCCTTCTTGTAATAATTATCCATTCTTTGATTTCTCTGAAGATAAGGGCTCTTTAGGGTTTATGGAGCTATTGGGTGTGCAAGACTACAATCATCTCCTTGATTTCCCTCTATCGTCACACGTGTCAGTGCCTCAAACCTCTGCGGTTAAGGAACCACCTGAGACTAAGAAAGAGTGTTCCGAGGTAACCAACAACCAGCAACCGACGACTCCGAACTCTTCATCCATTTCCTCCGCGTCCAGTGAGGTTCTCTATGATGAACAGAATAAAACTGTAGACCTAGCACCTGAACACCAAAAGACAAAGGAACAGTTGAAGGCAAAGAAGACAAATCAGAAGAGACAAAGAGAACCGAGATTCGCGTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTGAAAAACAGCCCCTTTCCCAGGAGCTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAACGCGTGGAGCGATCTTTCAGCGACCCAAGCATTGTGGTGACAACCTACGAAGGCCAACACACGCATCCAAGCCCAGTTATGGGTCGCTCCAACAACTTTGGTACGGTAATGTCTGGATCTGCTGGAAACTACATGTCCCAATATTATCATCAGCAACAAGTCCACGTCAATGCATTGTCTTCTTTGGGTTTCCTCTCTTCTTCTTCGTCTTCAAGGAATGCCACTTTTTCTCAAGAGACTGCCTTGTTAAGTGACTATGGGCTTCTTCAAGATGTTGTTCCTTCACATATGTTGAAAGAAGACTAG 873 0.4456 MENNKMMGVKKEDYAANIGSSSLPSCNNYPFFDFSEDKGSLGFMELLGVQDYNHLLDFPLSSHVSVPQTSAVKEPPETKKECSEVTNNQQPTTPNSSSISSASSEVLYDEQNKTVDLAPEHQKTKEQLKAKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFSDPSIVVTTYEGQHTHPSPVMGRSNNFGTVMSGSAGNYMSQYYHQQQVHVNALSSLGFLSSSSSSRNATFSQETALLSDYGLLQDVVPSHMLKED 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02070 290 MobiDBLite consensus disorder prediction 66 140 - -
Gma19g02070 290 PANTHER WRKY TRANSCRIPTION FACTOR 27 273 - -
Gma19g02070 290 MobiDBLite consensus disorder prediction 114 140 - -
Gma19g02070 290 MobiDBLite consensus disorder prediction 82 110 - -
Gma19g02070 290 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 27 273 IPR044810 GO:0003700
Gma19g02070 290 SMART WRKY_cls 154 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma19g02070 290 Coils Coil 118 138 - -
Gma19g02070 290 SUPERFAMILY WRKY DNA-binding domain 146 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma19g02070 290 Gene3D WRKY domain 139 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma19g02070 290 Pfam WRKY DNA -binding domain 155 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma19g02070 290 PIRSF WRKY_txn_fact_IIc 1 290 IPR017396 GO:0003700
Gma19g02070 290 ProSiteProfiles WRKY domain profile. 149 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02070 Gma-Chr19 49613149 49614703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02070 32 290 WRKY Transcription Factor Family AT2G47260 46.417 1.13e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma19g02070 WRKY 1.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02070 - - gmx:100816452 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02070 19 49613149 49614703 Gma19g02070 19 49613149 49614703 ECH
Gma19g02070 19 49613149 49614703 Gma03g02033 03 45929063 45930996 GST
Gma19g02070 19 49613149 49614703 Gma10g00109 10 1086339 1089572 PCT
Gma19g02070 19 49613149 49614703 Gma02g00104 02 1054439 1056767 PCT
Gma10g00109 10 1086339 1089572 Gma19g02070 19 49613149 49614703 PCT
Gma02g00104 02 1054439 1056767 Gma19g02070 19 49613149 49614703 PCT