Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02067 ATGTCGAAGAGGAAGTTCGGATTCGAAGGGTTCGGCATAAACCGCCAATCCACCTACAGCTTCGAGCGATCCCAGCCCCCTCAGCGACTCTACGTCCCTCCCTCCGCGCGCCacggccacgaccactacgaagacaccgacatcgacaacatcgacttcgacgacaacaacaacgacgacgggagcaagaataacaacggtggcggcaacgacgacgacgacgaaatcgacCCCTTGGATGCCTTCATGGAGGGGATTCACGAGGAGATGCGGGCTGCCCCGCCGCCGAAGGAGAAGGCGGAGGACCGGTACCGCGACGACGAGGACGACGATCCCCTGGAGAGCTTTCTGAAGGCGAAGAAGGATTTAGGGTTGACTCTCGCGTCCGACGCGCTGCACGCTGGGTATGATTCCGACGAGGAGGTTTATGCTGCTGCCAAAGCTGTGGATGCTGGTATGATTGAGTATGATTCTGATGATAACCCTATTGTTATTGACAAGAAGAAAATTGAACCCATTCCTGCTCTCGATCACTCTTCCATTGATTACGAGCCTTTCAATAAGGATTTTTATGAGGAGACACCTTCAATATCAGGTATGAGTGAGCAGGATGTAAGTGAATACAGAAAGAGTTTGGCTATTCGTGTATCGGGTTTTGATGTTCCCAAGCCAATAAAGACATTTGAGGACTGTGGGTTTCCTTCGCAGATTATGAATGCTATTAAAAAACAAGGATATGAGAAGCCAACATCTATACAATGTCAGGCTTTGCCAGTTGTGCTTTCGGGCAGGGATATCATTGGTATAGCAAAAACTGGTTCTGGTAAAACTGCTTCTTTTGTGCTTCCTATGATTGTGCATATCATGGATCAGCCTGAGCTTCAGAAGGAGGAGGGGCCTATAGGGGTCATATGTGCACCTACCAGAGAATTGGCGCATCAAATATATCTGGAGGCCAAGAAATTTGCAAAAGCATATGGGGTGCGTGTCTCTGCTGTCTATGGTGGAATGTCAAAACTTGAACAGTTCAAAGAACTGAAGGCGGGATGTGAGATAGTTGTTGCTACACCAGGAAGATTAATAGACATGCTGAAAATGAAGGCATTGACGATGATGAGAGCAACTTACCTGGTGCTTGATGAGGCTGATCGGATGTTTGATCTTGGGTTTGAGCCGCAAGTAAGGTCAATTGTTGGGCAGATTAGGCCGGACCGCCAAACTTTACTCTTTTCTGCAACTATGCCTCGAAAAGTTGAAAAGTTGGCCAGGGAAATCCTTTCTGATCCTATTAGAGTAACTGTTGGAGAGGTGGGGATGGCAAATGAAGATATTACTCAAGTTGTTCATGTAATTCCTTCCGATTCTGAGAAATTGCCCTGGCTTCTGGAAAAGCTGCCTGAAATGATTGATCAAGGTGATACCCTAGTTTTTGCTTCAAAAAAGGCTACTGTGGATGAAATTGAATCACAATTGGCTCAAAGAGGCTTTAAAGTTGCTGCCTTGCATGGTGATAAAGATCAAGCTTCTCGTATGGATATTTTACAGAAGTTTAAATCTGGCCTCTACCATGTGCTAATTGCAACTGATGTTGCTGCCCGTGGTCTTGACATCAAGTCAATTAAGTCAGTGGTAAACTTTGATATTGCAAAAGATATGGACATGCATGTCCATCGCATTGGAAGAACAGGCCGTGCTGGTGACAAGGATGGGGTTGCATACACTCTTATAACTCTGAAAGAAGCACGGTTTGCTGGTGAATTGGTCAATAGCTTAGTTGCTGCTGGTCAGAATGTGTCTGTGGAGTTGATGGATCTTGCTATGAAGGACGGGAGATTCAGGTCAAAACGTGATGCAAGAAAAGGAGGTGGAAAAAAAGGCAAAGGTAGAGGTGGGGGTGGCAGAGGCGTGCGAGGAGTGGATTTTGGCTTGGGTATTGGATATAATTCTGAGTCAAATAACGCACCATCTACCACAGCTCCCAGTCGATCTGCTGCCGTAAATTCTCTGAGAACAGGAATGATGTCACAATTTAAGAGTAACTTTGTTGCTGCTTCATCAAACTCTCAGAATCAAGGATTCGGTAGCAATACAAGCATGGCTGCTAATAAGAGACCAGCACTCCCTGGTTTTGTATCCGGTGGATCAATTGGCGGTGACATAAATACTTATCAGAATACTGCTTCACCCAATCCTGCTACATCAGCGGTAAATTCCACCAGTCAAGTTTCTGGAGTAAATCCTGGTCAGAAGAACACGAACAGTTCTAAACCTAAAGAAAGGCGGAGGCCATCAGATCTGTTCATCCACCTTAGGTTGAATTCATCGCCGAGCATCAGATCCGAAATGTCGATCGGAGATGCTTTTCTATGCTTACTATTCATAGCAACTTGTTCGATTTCAGCTGCTTCTGCTGATTCCATCTATGGCTGCGGTGGATTTGTCGAGGCGAGCTCATCGTTGGTGAAGTCGAGGAAACAAACTGATGTCAAATTGGACTATTCCGATGTCACGGTTGAGCTTCAAACTGTGGATGGACTGGTAAAGGATAGAACACAATGTGCTCCAAATGGATACTATTTTATTCCAGTATATGACAAGGGTTCCTTTGTAATTAAAATTAATGGACCTCCAGGATGGACATGGGATCCAGAAAAGGTTCCTGTGGTGGTTGACAATAATGGTTGCAATGGCAATGAAGATATAAACTTCCGTTTCACAGGGTTCACTATATCTGGTAGAGTTGTGGGAGCTGTTGGGGGAGAAAGTTGTTCAGTTAAAAATGGAGGTCCTTCAAATGTAAAAGTTGAACTTTTGTCCCTTTCGGGGGATCTTGTCTCTTCAGTCTTAACTTCATCGTCAGGGAGTTACTTGTTTACAAATATAATTCCAGGAAAATATGAACTACGCGCTTCAAATCCTGATATGAAAGTTGAAGTTAAAGGTTCAACACAGGTTGAATTGGGCTTTGGAAATGGGGTAGTTGATGATATTTTCTTTGTCCCTGGGTATAGTATCAGTGGATTTGTTGTTGCTCAGGGAAATCCAATATTAGGAGTTTATATTTTCTTACATTCAGATGATGTTTCTGAAGTAGAGTGTTTGAAAGGTTCTGCTAATGGTCCACGACAAGGAGTAGCTCTCTGTCATGCTGTATCAGATGCTGATGGGAAGTTCACATTCAATTCAATACCTTGTGGAAGTTATGAACTTGTGCCCTACTATAAGGGTGAAAATACAGTATTTGATGTTTCGCCACCCAGCGTCTCAGTTAATGTTAAGCACCAGCATGCAACAGTGCCTCAAAAGTTTCAGGTAACTGGATTTTCTGTTGGAGGCCGTGTAGTTGATGGAAATGGCATGGGAGTGGAGGGGGTCAAAATCATAGTTGATGGTCATGTAAGGTCTATTGCTGACAATCAAGGATATTACAAGCTTGATCAGGTTACATCCACGCACTATACCATAGAGGCCCAAAAGGAGCATTACAAATTCAAGAAATTGGAGAATTATATGGTATTGCCAAATATGGCTTCAATAGAAGACATCAATGCCATTTCATACAATCTTTGTGGTTTGGTTAGGATGGCTAGTGGTGGTCTGAAAGCGAAGGTGGCTTTGACTCATGGACCTGATAATGTGAAACCACAAAAGAAGCAAACAGATGAAAATGGAAACTTCTGCTTTGAGGTTCCTCCTGGTGAATATCGCTTGTCAGCCATTGCTGCTACTCCTGAGAATGGTGCTGGACTCATGTTTGCTCCATCTTATATTGATGTTGTGGTCAAAAGTCCCCTGTTGAATATTGAATTTTCACAAGCTTTGGTCAATATTCATGGTGCTGTATCCTGCAAGGAGAAATGTGGCCCATTTGTATCCGTTACTCTGGTGAGACAGGTTGATAAACACAATGAAGAGAGAAAGACAATTAGCTTGACCACCGAGAGTAGTGAATTTCTGTTTTCAGATGTTATTCCTGGAAAATACAGCCTTGAGGTCAAACATAGTTCCCCTGAATCAGTGACCTTGGAAGATAATTGGTGCTGGGAACAGAGCTTCATAGATGTAAATGTTGGTGCTGAGGACTTAGAAGGAATCCTTTTTGTTCAAAAAGGCTACTGGGTCAATATTATCTCCACTCACAATGTTGATGGTTACCTGACTCAACCCGATGGGTCAAATGTGAATTTTAAAATTCAGAAAGGTTCTCAGCATATATGTGTAGAACAACCTGGCGTACATGAATTTCATTTTGTTGACTCGTGTATCTTCTTTGGGAGTTCATCAGTGAAAATTAATACATCTGATCAATCACCCATCCATCTAACAGGAGAGAAGTATCTTCTCAATGGACAAATAAATGTGCAGTCTGGCTCACTTGATGCATTGCCTGATAGTATAGTTGTTGATATTAAACATGATAGAACTGGTGTTATTGATTATGCTACAGCCATACTTAAGTCCCATGTGAAAGATGAAACGGGGGCTGCTATATTTGAGTATTCCGTTTGGGCCAATCTAGGAGAAAAGCTTACCTTTGTTCCTCAGGACTCAAGGAGTGATGGGCAGAAGAAACTTTTATTTTATCCTAGAGAACATCAAGTATCAGTCACAGATGATAATTGTCAAGTTTATATTCCTACATTTTCTTGTCAACTGGGTGCATATATTGAAGGATCAGTTTCACCTCCTCTTTCTGGCGTCCATATCAGAATTTTTGCTGCTGGAGACAGCAGCATTAGTACACTTAAAAGTGGTGAATTGGTTCTTGAAACGACCACTGGTACTGATGGTTCCTTTGTGGCAGGTCCTCTGTACAATGATATTGGTTACAATGTTGAGGCTTCAAAGCCTGGATATCATTTAAAACAAGTTGCACCTCATTCCTTTACTTGTCAGAAGCTTAGTCAAATTTCAGTACACATACATCACAAAGATGATGCTAAAGAGCCCATTCCTTCTGTTCTGTTGTCTTTGAGTGGTGACAATGGTTATAGAAACAACTCAGTATCAGGAGCTGGAGGGACATTCCTGTTTGACAATTTGTTTCCTGGAATGTTTTATTTGCGTCCTGTTTTGAAGGAGTATGCTTTCTCACCTCCAGCACAGGCAATAGAGCTTGGAGCAGGGGAGTTCAAAGAAGTAGTTTTCCGGGCCACACGTGTAGCCTACAGTGCTACAGGTATAGTCACTCTCTTGTCTGGTCAACCCAAAGGAGAAGTTTCGGTTGAAGCAAGGTCAGAGTCAAAAGGCTATTTTGAGGAAACTGTGACAGATTCTTCTGGAAATTATCGTCTGAGAGGACTACTGCCTGATACTGACTATGTTGTTAAAGTGGCTAAAAGGGACGTGGGCAGTTCTAATATAGAGCGTGCATCTCCAGATTCTATTGCTGTCAAGGTTGGAACTGAGGATATCAAGGGATTGGATTTTATAGTTTTTGAGGAGCCGGAAATGACAATTATAAGTTGCCACGTTGAAGGAAATGGTACAGATGAACTACGTAAACACCTGATGGTAGAAATCAGGTCAGCTAGTGACCTAAACAAGATAGAGTCAGTCTTCCCCCTACCAATTTCAAACTTCTTCCAAGTGAAGGGCTTATCAAAGGGCAGACACCTTCTAAAGCTTCAATCTGGTCTCCCATCAAGCTCACTTAAATTTGAATCTGATCTCATTGAGGTCGACTTGGAGAAAAATGTTCAGATCCATGTTGGCCCACTGAGATACTGGATTGAAGATCAGCTGAAGCAGGAGCTGACTCCGGCACCAGTATTCCCTCTTATAGTTGCATTTCTAGTTGTTGCACTATTTCTTAGCATGCCAAGATTGAAGGATTTGTATCAAGCCACGGTAGACATACCCACACCAGGACTCACTGCGGTTTCAAGAAAAGACGTGAAGAAGCCGATGTTGCGAAAGAAGACTTATTAA 5931 0.4198 MSKRKFGFEGFGINRQSTYSFERSQPPQRLYVPPSARHGHDHYEDTDIDNIDFDDNNNDDGSKNNNGGGNDDDDEIDPLDAFMEGIHEEMRAAPPPKEKAEDRYRDDEDDDPLESFLKAKKDLGLTLASDALHAGYDSDEEVYAAAKAVDAGMIEYDSDDNPIVIDKKKIEPIPALDHSSIDYEPFNKDFYEETPSISGMSEQDVSEYRKSLAIRVSGFDVPKPIKTFEDCGFPSQIMNAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTASFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLEAKKFAKAYGVRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPIRVTVGEVGMANEDITQVVHVIPSDSEKLPWLLEKLPEMIDQGDTLVFASKKATVDEIESQLAQRGFKVAALHGDKDQASRMDILQKFKSGLYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITLKEARFAGELVNSLVAAGQNVSVELMDLAMKDGRFRSKRDARKGGGKKGKGRGGGGRGVRGVDFGLGIGYNSESNNAPSTTAPSRSAAVNSLRTGMMSQFKSNFVAASSNSQNQGFGSNTSMAANKRPALPGFVSGGSIGGDINTYQNTASPNPATSAVNSTSQVSGVNPGQKNTNSSKPKERRRPSDLFIHLRLNSSPSIRSEMSIGDAFLCLLFIATCSISAASADSIYGCGGFVEASSSLVKSRKQTDVKLDYSDVTVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKINGPPGWTWDPEKVPVVVDNNGCNGNEDINFRFTGFTISGRVVGAVGGESCSVKNGGPSNVKVELLSLSGDLVSSVLTSSSGSYLFTNIIPGKYELRASNPDMKVEVKGSTQVELGFGNGVVDDIFFVPGYSISGFVVAQGNPILGVYIFLHSDDVSEVECLKGSANGPRQGVALCHAVSDADGKFTFNSIPCGSYELVPYYKGENTVFDVSPPSVSVNVKHQHATVPQKFQVTGFSVGGRVVDGNGMGVEGVKIIVDGHVRSIADNQGYYKLDQVTSTHYTIEAQKEHYKFKKLENYMVLPNMASIEDINAISYNLCGLVRMASGGLKAKVALTHGPDNVKPQKKQTDENGNFCFEVPPGEYRLSAIAATPENGAGLMFAPSYIDVVVKSPLLNIEFSQALVNIHGAVSCKEKCGPFVSVTLVRQVDKHNEERKTISLTTESSEFLFSDVIPGKYSLEVKHSSPESVTLEDNWCWEQSFIDVNVGAEDLEGILFVQKGYWVNIISTHNVDGYLTQPDGSNVNFKIQKGSQHICVEQPGVHEFHFVDSCIFFGSSSVKINTSDQSPIHLTGEKYLLNGQINVQSGSLDALPDSIVVDIKHDRTGVIDYATAILKSHVKDETGAAIFEYSVWANLGEKLTFVPQDSRSDGQKKLLFYPREHQVSVTDDNCQVYIPTFSCQLGAYIEGSVSPPLSGVHIRIFAAGDSSISTLKSGELVLETTTGTDGSFVAGPLYNDIGYNVEASKPGYHLKQVAPHSFTCQKLSQISVHIHHKDDAKEPIPSVLLSLSGDNGYRNNSVSGAGGTFLFDNLFPGMFYLRPVLKEYAFSPPAQAIELGAGEFKEVVFRATRVAYSATGIVTLLSGQPKGEVSVEARSESKGYFEETVTDSSGNYRLRGLLPDTDYVVKVAKRDVGSSNIERASPDSIAVKVGTEDIKGLDFIVFEEPEMTIISCHVEGNGTDELRKHLMVEIRSASDLNKIESVFPLPISNFFQVKGLSKGRHLLKLQSGLPSSSLKFESDLIEVDLEKNVQIHVGPLRYWIEDQLKQELTPAPVFPLIVAFLVVALFLSMPRLKDLYQATVDIPTPGLTAVSRKDVKKPMLRKKTY 1976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02067 1976 CDD SF2_C_DEAD 444 576 - -
Gma19g02067 1976 Gene3D - 434 610 IPR027417 -
Gma19g02067 1976 Pfam DEAD/DEAH box helicase 250 421 IPR011545 GO:0003676|GO:0005524
Gma19g02067 1976 MobiDBLite consensus disorder prediction 617 631 - -
Gma19g02067 1976 MobiDBLite consensus disorder prediction 1 110 - -
Gma19g02067 1976 CDD DEADc_DDX42 237 433 - -
Gma19g02067 1976 SUPERFAMILY Cna protein B-type domain 1645 1702 - -
Gma19g02067 1976 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 378 386 IPR000629 -
Gma19g02067 1976 Gene3D - 189 433 IPR027417 -
Gma19g02067 1976 MobiDBLite consensus disorder prediction 721 753 - -
Gma19g02067 1976 MobiDBLite consensus disorder prediction 721 763 - -
Gma19g02067 1976 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 788 1956 - -
Gma19g02067 1976 SUPERFAMILY Carboxypeptidase regulatory domain-like 1108 1175 IPR008969 -
Gma19g02067 1976 SUPERFAMILY Starch-binding domain-like 1000 1078 IPR013784 GO:0030246
Gma19g02067 1976 SUPERFAMILY Cna protein B-type domain 927 978 - -
Gma19g02067 1976 Gene3D Immunoglobulins 924 996 IPR013783 -
Gma19g02067 1976 SMART helicmild6 485 566 IPR001650 -
Gma19g02067 1976 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 457 606 IPR001650 -
Gma19g02067 1976 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 435 IPR027417 -
Gma19g02067 1976 Pfam Helicase conserved C-terminal domain 462 566 IPR001650 -
Gma19g02067 1976 SMART ultradead3 245 447 IPR014001 -
Gma19g02067 1976 MobiDBLite consensus disorder prediction 613 636 - -
Gma19g02067 1976 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 257 432 IPR014001 -
Gma19g02067 1976 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 600 IPR027417 -
Gma19g02067 1976 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 226 254 IPR014014 GO:0003724
Gma19g02067 1976 MobiDBLite consensus disorder prediction 80 110 - -
Gma19g02067 1976 Gene3D - 1110 1182 - -
Gma19g02067 1976 PANTHER NODAL MODULATOR 1-RELATED 788 1956 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02067 Gma-Chr19 49562476 49582346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02067 226 583 Eukaryotic Initiation Factors Gene Family AT3G13920 35.457 4.35e-61 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02067 - - gmx:100815384 2357.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02067 19 49562476 49582346 Gma19g02067 19 49562476 49582346 ECH
Gma19g02067 19 49562476 49582346 Gma03g02031 03 45882991 45903108 GST