Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02066 ATGTCAATTGGTATATTGAAAAAGGTTCAAGGCTTGGTGCAGAAATGGATGCTTATATTATCTTGCTTGGTATTTGTGATTGAGGCTGGTGAAAATGATAAAACAATGGAGCCCCCTTCTTTATATGATTCTGGATCACCTTTGCCCTTTGTTGTTGTTCATGATCTACCTCTACCAGCAAATCTCCATGTGTCGAAGCATGTGCTTTCTCATGGTGCACCAATTGCTGCACTGTCACCAGTCAAGCCTCCTTCATATGGTCCTTTCACAAGTAATGGTCACCCCCCTGCAAGTTCACATTTATCCATACTATTCAAGAAGAGTGAAATGAAACCTCCAATTTCTGGCTTTAAAGATATTCATATTGCTCCTGTGCATTCTACTGCAGCTGCAGGCCCTTCCGCTTTGGCCCAGCCACCATTGTCTCCTTATGCTTCTAATTGTTGTAAACAAGACATGGTGCTGAAAAGGGGCAGTAAGGATTGCCAATGTGCATATCCCATAAAGCTAGACCTTTTTCTTTCAAATGTCTCTCAAAATCCTAATTGGAATGATTTTCTTGATGAATTAGCTACCCAGCTTGGGTTGCGAAATACCCAGATTGAGCTGATAAACTTTTATGTACTCAGCTTATCAACATTAAATATATCGATGAATATTACTCCACATAAAGGCATCAGTTTCTCTGCCAATGAAGTTTCTAAAATAAACTCTTCGCTTTCAATGCATAAGGTTCAACTAAACCCTGGATTAGTGGGTGGATACAAACTTCTCAATTTAACGTGGTTTGAACCACCTCCTCCTTCTCAAGCTCCTACTTTAGCTGCATCACCTGTGAATACACCTTTGCATCATTCACCTACTGCTACATCATCATCGAGTTCTCCGAAAAGAGGAAGGCATTCAAATTTGTTTCTTATTCTTGGAATTGCTATTGGCATAATCTTCATTGCTATCATATCTGTACTTATATTCTGTTTATGTACGTTCCTGCCAAAAGCAAACACACCTCCTATAGACACTGAAAAGCCAAGGACAGAGAGTGCAATTTCAACTGTGGGTTCTCTTCCCCACCCAACTAGTACACGTTTTATTGCTTATGAAGAGCTTAAAGAAGCAACAAACAATTTTGAAGCAGCGAGCATACTTGGAGAAGGAGGGTTTGGTAGAGTTTTTAAAGGTGTCTTAAATGACGGTACTCCTGTAGCAATTAAGAGGCTTACCAGTGGAGGGCAACAGGGTGACAAAGAGTTTTTGGTTGAGGTTGAGATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATACTTCATTAATCGTGACTCATCACAAAATTTACTTTGCTATGAGCTTGTCCCTAATGGAAGTTTGGAGGCTTGGCTTCATGGTCCCTTGGGAATCAACTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCGCTGGATGCTGCGAGGGGACTTTCATACCTGCATGAAGACTCACAGCCCTGTGTAATACACAGAGACTTCAAGGCATCCAACATACTGCTTGAGAACAACTTTCAAGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAAGCACCTGAAGGAAGATCTAATTATTTGTCTACTCGTGTCATGGGGACATTTGGGTACGTAGCTCCTGAATATGCCATGACTGGGCACCTACTtgttaaaagtgatgtttatagctatggtgttgtcttgctggaactgcttactggtaggaagcctgtggaTATGTCACAGCCAACTGGACAAGAGAACCTTGTTACTTGGGCTAGGCCAATCCTTAGAGATAAGGAGCGGTTGGAAGAGATTGCTGATCCAAGACTTGGGGGAGAGTATCCAAAGGAAGATTTTGTACGTGTTTGCACTATTGCTGCGGCCTGTGTTGCTCCGGAAGCAAACCAACGACCTACAATGGGTGAAGTGGTACAATCACTTAAAATGGTGCAGCGCGTCACAGAATACCATGATTCTGTGTTAGCCTCATCCAATGCACGACCCAACCTAAGACAGTCCTCTAGCACTTTTGAATTTGATGGAACGTCTTCGATGTTCTCTTCAGGTCCTTACTCTGGTCTAAGTGCCTTTGACAATGACAACATTTCTAGGACCGTGGTTTTCTCTGAAGATCTTTGTGAAGGACGATGA 2166 0.41 MSIGILKKVQGLVQKWMLILSCLVFVIEAGENDKTMEPPSLYDSGSPLPFVVVHDLPLPANLHVSKHVLSHGAPIAALSPVKPPSYGPFTSNGHPPASSHLSILFKKSEMKPPISGFKDIHIAPVHSTAAAGPSALAQPPLSPYASNCCKQDMVLKRGSKDCQCAYPIKLDLFLSNVSQNPNWNDFLDELATQLGLRNTQIELINFYVLSLSTLNISMNITPHKGISFSANEVSKINSSLSMHKVQLNPGLVGGYKLLNLTWFEPPPPSQAPTLAASPVNTPLHHSPTATSSSSSPKRGRHSNLFLILGIAIGIIFIAIISVLIFCLCTFLPKANTPPIDTEKPRTESAISTVGSLPHPTSTRFIAYEELKEATNNFEAASILGEGGFGRVFKGVLNDGTPVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYFINRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFQAKVADFGLAKQAPEGRSNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKERLEEIADPRLGGEYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRVTEYHDSVLASSNARPNLRQSSSTFEFDGTSSMFSSGPYSGLSAFDNDNISRTVVFSEDLCEGR 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02066 721 ProSitePatterns Protein kinases ATP-binding region signature. 383 405 IPR017441 GO:0005524
Gma19g02066 721 ProSiteProfiles Protein kinase domain profile. 377 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g02066 721 MobiDBLite consensus disorder prediction 274 299 - -
Gma19g02066 721 Gene3D Transferase(Phosphotransferase) domain 1 455 672 - -
Gma19g02066 721 Gene3D Phosphorylase Kinase; domain 1 341 454 - -
Gma19g02066 721 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 9 721 - -
Gma19g02066 721 CDD STKc_IRAK 383 653 - -
Gma19g02066 721 SUPERFAMILY Protein kinase-like (PK-like) 351 654 IPR011009 -
Gma19g02066 721 MobiDBLite consensus disorder prediction 271 299 - -
Gma19g02066 721 PANTHER OS01G0750732 PROTEIN 9 721 - -
Gma19g02066 721 Pfam Protein tyrosine and serine/threonine kinase 380 652 IPR001245 GO:0004672|GO:0006468
Gma19g02066 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02066 Gma-Chr19 49554883 49561211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02066 15 721 Receptor kinase-like Gene Family AT4G02010 68.583 0.0 962
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gma19g02066 PK_Tyr_Ser-Thr 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02066 - - gmx:100775615 1402.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02066 19 49554883 49561211 Gma19g02066 19 49554883 49561211 ECH
Gma19g02066 19 49554883 49561211 Gma03g02030 03 45872482 45880278 GST
Gma19g02066 19 49554883 49561211 Gma10g00114 10 1129796 1136735 PCT
Gma19g02066 19 49554883 49561211 Gma02g00108 02 1096342 1103723 PCT
Gma10g00114 10 1129796 1136735 Gma19g02066 19 49554883 49561211 PCT
Gma02g00108 02 1096342 1103723 Gma19g02066 19 49554883 49561211 PCT