Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02060 ATGGAAATTGACCAATTTTCTTCCACAGATTTAAATTTCAAAGGAACCCAGATGGGTTATGGTTCTACACAAGAGGATGTGTTCCAAGGTAAAGAGAGTCTCTCTGGAATGGAATTGCTGGGAGAGATTGATCCTCTCCCTGCTGAGAATGGAAAAGGAGTCAAATTGTTCAAATATCAAGATCAGAAACAGCTACAAGAACCCAAAGCTGATAACTTGATGTTGGAAGAGGTCAACTTTGACCCTGATGTCCAAATGCAACCAACACAACTATTTCAGGAAACTGAAGGACTAATGAAACATGGTGTGGCAAGTACAGAACCAGTTGAATACAATAAGCAGGTGGCACCAACACCATCATTAGCATCTTTAGAACTCTTGAGAAATTACGGAAGCCGGTTCAAGAGGCTAAGCGAGCAAAATATAAGCACCTTAAGCAATATTGAAACTTCCTTTGATCGCCAGAAGATGTCAACTGAAGAAATAATAAGAGTGGCTGGAGCAAGGTATATCCAATATTCTGCGCATTGGAATGATAGTTTTTACATCCCTATGCATCCATACGGATTGGATCTTGGTGGTTTGTCTGAGGAAGAAAATAGAGACATAGAACTTGCTCAGTTTCTCCTAGCTGCAGCCGAGAGGGTAGGCTGCCAACAATTCGAACGTGCAAATGGGTTACTTCTCCATTGTGAATGGAGTTCAAATGCCAGTGCAAACCCTGTTCAAAGAGTTATCTTTCATTTCGCTCGAGCACTTCGAGAGAGAATATACAAAGAAACAGGAAGGATGACAGTTAAGGGATCAGGGAAAAATGAAGAAAGGGAGTTACTTCAGAAGATGGACACCAACATTGCCCTTAAATGCCATCTAAAAGTTCCTTTCAATCAAGTAATGCAATTCACTGGGATACAAGCTATAGTGGAGCATGTTGCATGTGAGACCAAAATCCATCTTATAGATCTTGAAATAAGAAGTGGTGTACAATACACAGCTTTGATGCAAGCACTGGCAGAGCGCCGGGATCGCATAGTGCAACTTTTGAAGATAACTGCCATTGGACTTAGTTCATTGAAAACCATGATAGAAGAGACTGGCAAAAGGTTAGCTAGTTTTGCTGAATCCTTGAACTTACCCTTTTCATATAAGACAGTTTTTGTGACCGACATTGCGGAAATAAGGGAAGATCATTTCGAAATTGGAGAGGATGAAGCTGTGGCAGTCTACTCTCCATATTTTCTAAGGAGCATGGTATCGAGGCCTGATTGTATGGAAAACTTGATGAGAGTTATAAGAAATATCAAACCAGTTATAATGATAGTCCTTGAAGTAGAAGCAAACCATAACTCGCCCTCCTTTGTGAACCGCTTCATTGAAGCATTGTTCTTCTACTCAGCATATTTTGATTGCCTTGAAACCTGCATAAAACATGAGATTGAGTGCAGAATGACAATAGAAGCAGTATTATCTGAAGGGATAAGAGACATTGTTGCTATGGAAGGAAGGGAAAGGACAGTTAGAAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTACAGAATGGTTGAAACCGGGTTTAGTGAGTCATCTCTGTACCATGCTCACTTGGTTGCCAAAGGGTTTTCTTTTGGGAAATTCTGCACTATAGAAAAAAATGGAAAGTGTCTTATAGTGGGATGGAAAGGGACCCCAATGCATTCAATCTCAGCTTGGAGGTTTCTTTGA 1731 0.405 MEIDQFSSTDLNFKGTQMGYGSTQEDVFQGKESLSGMELLGEIDPLPAENGKGVKLFKYQDQKQLQEPKADNLMLEEVNFDPDVQMQPTQLFQETEGLMKHGVASTEPVEYNKQVAPTPSLASLELLRNYGSRFKRLSEQNISTLSNIETSFDRQKMSTEEIIRVAGARYIQYSAHWNDSFYIPMHPYGLDLGGLSEEENRDIELAQFLLAAAERVGCQQFERANGLLLHCEWSSNASANPVQRVIFHFARALRERIYKETGRMTVKGSGKNEERELLQKMDTNIALKCHLKVPFNQVMQFTGIQAIVEHVACETKIHLIDLEIRSGVQYTALMQALAERRDRIVQLLKITAIGLSSLKTMIEETGKRLASFAESLNLPFSYKTVFVTDIAEIREDHFEIGEDEAVAVYSPYFLRSMVSRPDCMENLMRVIRNIKPVIMIVLEVEANHNSPSFVNRFIEALFFYSAYFDCLETCIKHEIECRMTIEAVLSEGIRDIVAMEGRERTVRNVKIDVWRRFFARYRMVETGFSESSLYHAHLVAKGFSFGKFCTIEKNGKCLIVGWKGTPMHSISAWRFL 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02060 576 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 59 574 - -
Gma19g02060 576 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 59 574 IPR005202 -
Gma19g02060 576 Pfam GRAS domain family 206 574 IPR005202 -
Gma19g02060 576 ProSiteProfiles GRAS family profile. 196 574 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02060 Gma-Chr19 49524489 49526569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02060 203 575 GRAS Transcription Factor Family AT1G66350 29.679 1.10e-50 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma19g02060 GRAS 4.9e-80 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02060 - - gmx:100791952 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02060 19 49524489 49526569 Gma19g02060 19 49524489 49526569 ECH
Gma19g02060 19 49524489 49526569 Gma03g02026 03 45844474 45846599 GST