Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02059 ATGACACTTGAGGAATGCAAGTCTTCTGAGGAGGCATTGAGTATCATACAAGAGTTTGTTAAGACTACTGATTCACAAATTCAGGAAAGGTATAAAAAACTCAAGAAAAAGAATATGGAAAGTCTAGATGATCATTCTGAAGATTGTCATTGTAAAGGATGCAAGTGTCACCTTGGAATATGTTTGGAGAAAAGCTTGAGTGCTACTTTAGAATCTTTTGATAACATTTTTTGTCGTCAGTGCTTGATCTTTGATTGTCCTATGCATGGCACTTTCCAACCTTTAATATATACGAGTGAAAAGCAACAAGTGTGGTCTGAACATGAAGGTGATAAGCAACCATGCAGTGACCAGTGTTACCTACTGGACAAGGGAGTTATGGAAGGACAAAAAGATATTCAGTTGTCTAATTCAACGAAAGTGCAAGCTGATGAGATGACAAATAACTCAAATTGGAAACAGCTAGAGAAAAATTTATATTTGAAGGGAGTAGAATTGTTTGGAAAAAATAGTTGCCTTGTAGCTCGAAACTTACTTCCTGGCTTTAAGACTTGCTTAGAAGTAGCTAGGTACATGTTTGCTAGTGGAGAGTCAATGCCTCATGAATCCATACCAAGTTCAATCACAGACATAAATGATAAGATTAATGCAGAGTACATAATGGGGTGGGAGAAGTGGTTTGATGATGATGGAAAATTAAGTATTCTACATACAATATGCAGAAGAATTGATCATGGGAAAGACCAATGTGATAAGCAATATACTCCATGTGGGTGTAAGGGAATATGCATAGAGGGATGTCCTTGTCTTAGTACGGGAACTTGTGAAAAATACTGTGGGTGTTCAAAGTTATGCAATAATCGATTCAAAGGATGTTATTGTTTTAAGAGTCAATGTAGAAGCCAACTATGTCCATGCTTTGCAGCAAACCGTGAATGTGACCCAGATGTCTGTCGAAATTGTTGGGTTAGTTGCGGTGATGGTTCATTAGGGGAGCCACCTCGACACGGAGATGGTCAATGTGCAAACATGAATCTTCTTTTAGGGAAAAAAGAAAGGATTCTTTTGTCAAAGTCAAATGTTGCAGGATGGGGAGCCTTCACAAAGAACCCAATTATAAAAAATACTTGTCTAGGAGAGTACACAGGTGAACTAATCACTCACAGAGAAGCAGAGAAACGTGGGAAACTATATGACCGTATAAACAATTCATATCTTTTTAACGTCAATGATAAGTGGGTTATTGATGCACGCCGCTTTGGGAATAAGTTAAAATTTGCAAATCACTCATCAAAACCCAACTGCTATGCAAAGGTGATGTTGGTTGGAGGAGATCATCGAGTTGGCATATTTGCCAAGGAAAACATTAAAGCCGGTGATGAGCTTTTCTATCATTATTACTATAATGAAGAGTGTGCACCACCATGGGCTCTTCCACCAAAAGTCGAGGCTTCTAAGACACATAAATATGTTTCTCAGGGCAGGGCAAAGAAACATTGA 1500 0.3827 MTLEECKSSEEALSIIQEFVKTTDSQIQERYKKLKKKNMESLDDHSEDCHCKGCKCHLGICLEKSLSATLESFDNIFCRQCLIFDCPMHGTFQPLIYTSEKQQVWSEHEGDKQPCSDQCYLLDKGVMEGQKDIQLSNSTKVQADEMTNNSNWKQLEKNLYLKGVELFGKNSCLVARNLLPGFKTCLEVARYMFASGESMPHESIPSSITDINDKINAEYIMGWEKWFDDDGKLSILHTICRRIDHGKDQCDKQYTPCGCKGICIEGCPCLSTGTCEKYCGCSKLCNNRFKGCYCFKSQCRSQLCPCFAANRECDPDVCRNCWVSCGDGSLGEPPRHGDGQCANMNLLLGKKERILLSKSNVAGWGAFTKNPIIKNTCLGEYTGELITHREAEKRGKLYDRINNSYLFNVNDKWVIDARRFGNKLKFANHSSKPNCYAKVMLVGGDHRVGIFAKENIKAGDELFYHYYYNEECAPPWALPPKVEASKTHKYVSQGRAKKH 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02059 499 SMART set_7 352 475 IPR001214 GO:0005515
Gma19g02059 499 SUPERFAMILY SET domain 254 470 IPR046341 -
Gma19g02059 499 ProSiteProfiles SET domain profile. 352 467 IPR001214 GO:0005515
Gma19g02059 499 CDD SET_EZH 352 468 - -
Gma19g02059 499 Gene3D SET domain 249 468 IPR046341 -
Gma19g02059 499 Pfam SET domain 363 466 IPR001214 GO:0005515
Gma19g02059 499 SMART CXC_2 287 324 IPR033467 -
Gma19g02059 499 Pfam CXC domain 291 322 IPR041355 -
Gma19g02059 499 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 2 139 IPR045318 GO:0006338|GO:0018024
Gma19g02059 499 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 2 139 - -
Gma19g02059 499 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 129 499 - -
Gma19g02059 499 ProSiteProfiles CXC domain profile. 240 338 IPR026489 -
Gma19g02059 499 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 129 499 IPR045318 GO:0006338|GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02059 Gma-Chr19 49510711 49516290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02059 341 466 C2H2 Transcription Factor Family AT2G23740 29.371 1.61e-10 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma19g02059 SET 3.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02059 - K11430 gmx:100819982 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02059 19 49510711 49516290 Gma19g02059 19 49510711 49516290 ECH
Gma19g02059 19 49510711 49516290 Gma03g02025 03 45831766 45836921 GST
Gma19g02059 19 49510711 49516290 Gma10g00121 10 1167250 1177384 PCT
Gma19g02059 19 49510711 49516290 Gma02g00116 02 1132150 1140854 PCT
Gma10g00121 10 1167250 1177384 Gma19g02059 19 49510711 49516290 PCT
Gma02g00116 02 1132150 1140854 Gma19g02059 19 49510711 49516290 PCT