Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02053 ATGGCTCCTTCCCGCCGCAACACCAACGGTCGATCACCGCTCGTCAATCAACAGAGTCAAATCACTTCCTTCTTCACCAAATCCGCTTCCCCTTCGCCCTCTCCCACTCTCTCCAAAACCaaccctaaccctaaccctaaccctaaccctaGTCCCACCCCTGCTACTCCTTCTCCTCTCAATCCCAAACGCTCCAAGCCCCTTCTTGTAATCGGCGCTTCCACTTCTCCACCCTCCGCTTCGCCTTCTCTCTACTTTCAAGAGCTCATTGGCCGAAGGATCAAGGTTTATTGGCCCTTGGACAAAGCCTGGTACGAAGGCTCCGTCAAATCCTTCGATAGCCTCACCTCTAAGCACGTGGTTCGTTACGACGATGGCGAAGAAGAATCCCTCGACCTCTCCAAGGAGAAGATCGAGTGGCTTCAGGAATCGTCTTCCAAGAAACTTAAACGCCTGCGTCGCGGCGTCCCCGCCGTTAGGAAGATGATGATCGACGACGACGACGAAGAAGTTGAAGAAGAAGAAAGTCACAAAAAAGATGATGATGATGATGATGATTCCAATGACGAAGATTGGGGGATGAAGGCTGCATTGGAGGATGCTGGGGATGCCGAAGAAGATACGGATTTAGAGGATGAAAACGACGTGGCAGAGAGGGCTAAAGGGAAAAAGGTAGAGACTAAAAAGCGGAAACTAAGCGGAACAGAGAAACAAGAGCCGGCAAAAAAGAGCAAGAGTGGAGTGGAAGTTGGTAAGGGAGCTTTCAAGCTCTCAGTGTTGGAGCCTACGAGTAATTTGGAGATTAAAGAGACATCTAATGGCACTGACAATGTTGCGATTACTGAGATCTCTGAAAGATTTGCACTGCGTGAAGCTCAGAAATTGCGCTTCCTGAAGGAAGATCGCAGGGATGCCAAGCGAAGGCGACCAGGGGATGAAAATTATGATTCAAGAACAATCTACTTGCCTCCTGATTTCTTAAGGAGTTTGTCAGATGGTCAGAAACAATGGTGGGAGTTCAAGTCAAAGCATATGGACAAAGTTTTGTTTTTCAAGATGGGTAAATTTTATGAGCTTTTTGAGATGGATGCACATGTAGGTGCGAAAGAGCTTGACTTGCAGTATATGAAGGGAGACCAACCTCATTGTGGATTTCCAGAGAAGAATTTCTCAATGAACGTGGAGAAACTAGCTAGGAAGGGTTATCGAGTTCTTGTTGTAGAGCAGACTGAAACACCTGAACAGCTGGAGCTTCGTCGCAAGGAGAAGGGCTCTAAAGATAAGGTTGTAAGGCGTGAAATATGTTCAGTGGTTACAAAAGGTACATTAACAGATGGGGAGTTGCTGTCAGCAAACCCAGAAGCTGCATATTTAATGGCCCTGACGGAGCATCACGAAAATCACCCAACTGAAGTTTCAGAGCATCTCTATGGTGTTTGTATAGTTGATGTTGCCACAAGTAGAGTCATTCTTGGACAGTTTAAGGATGACTTGGAGTGCAGTGTCTTGTGCTGTATCTTATCTGAGATCAGGCCTGTTGAAATTGTGAAACCTGCTAAACTACTCAGTGCTGAAACGGAGAGAGTACTGCTGAAGCATACCAGAGATCCTTTAGTGAATGAATTAGTTCCAATTGTGGAATTCTGGGATGCTGACAAAACTGTGGATCAATTAAAGAGAATTTATGGGAACTCTAATGATGTTAGTGTTAACAATAATGAGTTAGATTGCCTGCCAGATGTTTTACTGGAGCTGGTGAAAACAGGTGACGACAGTAGAAGTGCACTTTCAGCACTAGGTGGTGCTCTGTATTATCTGAGACAGGCTTTTCTAGATGAGAGATTGCTTAGATTTGCAAAGTTTGAGTTACTTCCTTGTTCTGGTTTTGGTGATCTTGCTTCAAAACCCTACATGGTTCTTGACGCGGCTGCCCTGGAGAATCTTGAGATTTTTGAGAATAGCAGGAATGGAGATTCTTCAGGCACGCTCTATGCCCAACTAAACCAATGCGTTACTGCTTTTGGAAAGAGATTGCTAAAGACTTGGCTTGCAAGACCATTATGTCATGTGGAGTCAGTTAAGGAACGCCAGGAAGCTGTTGCAGGTTTGAAGGGAGTTAATCTACCTTCTGCACTAGAATTTCGAAAAGCATTATACAAGCTACCTGACATGGAGCGGTTGCTTGCCCGCATCTTTTCCTCTAGTGAAGCTAGTGGAAGGAATGCTAATAGAGTGGTTCTGTACGAGGATGCTTCTAAGAAGCAACTGCAAGAGTTTATTTTAGCTCTGCGTGGTTGTGAACAGATGGCTCAAGCATGCTTTTCACTTGGTGTCATTTTGAGTCATGTAAAATCTAGACAACTTCATCATCTGTTAACACCGGGTAAAGTTCTTCCTGATGTTTGTATGGATCTTAATCATTTCAAGGATGCCTTTGATTGGGTGGAAGCCAATAATTCTGGGCGTATAATACCTCGTGAAGGAGTTGACACAGAGTATGACTCAGCCTGTAAGGCGGTTAAAGAGATTGAGTCCAGTTTATTGAAGCATCTTAAGGAACAAATGAAACTACTTGGAAGCACATCAATTACTTATGTCAATGTTGGAAAGGATACATACCTATTGGAAGTTCCAGAAAATTTGTCTAAGAATATTCCTCGAGATTATGAACTGCGCTCATCCAGAAAAGGCTTCTTTAGATACTGGTCTCCAGATATTAAAGTTTTCTTAAGAGAGCTCTCCCATGCTGAATCTGAAAAGGAGTCCTTGTTGAAAAGTACATTGCAGAGATTAATTGGGCGTTTTTGTGAACATCACGCTAAGTGGAAGCAGTTGGTGTCTACAACTGCAGAACTGGATGTCTTGATCAGTTTAGCAATTGCTGGTGACTACTATGAAGGACCAACATGTAGACCTAGTTTTGTAGGCACATTATGTACAAAAGAAGCTCCTTACCTCCATGCCAAAAGTTTGGGACACCCAGTCCTTAGGAGTGATACCTTAGGCAAGGGTGACTTTGTACCCAATGACATAACCATTGGTGGTTCAGATCATGCTAGCTTTATTCTTCTAACAGGTCCTAACATGGGTGGGAAGTCAACCCTTCTTCGTCAAGTTTGCTTGACTGTGATTTTGGCCCAGGTAGGAGCTGATGTCCCAGCAGAAAGTTTTGATTTGTCCCCTGTTGACCGGATTTTTGTTAGAATGGGGGCCAAAGATAATATAATGGCAGGCCAAAGTACATTTTTAACTGAGCTTTCAGAAACTGCATCAATGCTGTCATCAGCTACTTGTAATTCATTGGTGGCTCTGGATGAGCTTGGGCGAGGGACTGCAACTTCTGATGGGCAAGCCATTGCGGAATCAGTATTAGAACATCTTGTGCGGAAGGTGCAGTGTCGCGGATTGTTTTCTACCCACTATCATCGATTAGCTGTTGATTATCTCAAAGATCCGAAGGTCTGTCTCTGCCACATGGCATGCCAAGTTGGTAGTGGAATTGCAGGTTTAGACGAAGTCACCTTTCTTTACAGGCTTACCCCCGGTGCTTGCCCCAAGAGCTATGGTGTTAATGTTGCTCGGATAGCTGGCCTTCCAACTTCTGTGCTTCAGAAGGCTGCTGCCAAATCCAGAGAATTTGAGGCCACTTATGGTAAATGCAGAAAGGTATCTACTGTAACAAACTCTCCCAATAAAAATTGGGTTGATGAGATAGCAGCAATCATTCAAATATTGAACAACGCGGCAACACAGGAAACCATTTGCGTTGGTTCCCTAAGTGAACTTCAGGATAAAGCAAGAGAACTAATGCAAGGATGTTAA 3822 0.4388 MAPSRRNTNGRSPLVNQQSQITSFFTKSASPSPSPTLSKTNPNPNPNPNPSPTPATPSPLNPKRSKPLLVIGASTSPPSASPSLYFQELIGRRIKVYWPLDKAWYEGSVKSFDSLTSKHVVRYDDGEEESLDLSKEKIEWLQESSSKKLKRLRRGVPAVRKMMIDDDDEEVEEEESHKKDDDDDDDSNDEDWGMKAALEDAGDAEEDTDLEDENDVAERAKGKKVETKKRKLSGTEKQEPAKKSKSGVEVGKGAFKLSVLEPTSNLEIKETSNGTDNVAITEISERFALREAQKLRFLKEDRRDAKRRRPGDENYDSRTIYLPPDFLRSLSDGQKQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGDQPHCGFPEKNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVRREICSVVTKGTLTDGELLSANPEAAYLMALTEHHENHPTEVSEHLYGVCIVDVATSRVILGQFKDDLECSVLCCILSEIRPVEIVKPAKLLSAETERVLLKHTRDPLVNELVPIVEFWDADKTVDQLKRIYGNSNDVSVNNNELDCLPDVLLELVKTGDDSRSALSALGGALYYLRQAFLDERLLRFAKFELLPCSGFGDLASKPYMVLDAAALENLEIFENSRNGDSSGTLYAQLNQCVTAFGKRLLKTWLARPLCHVESVKERQEAVAGLKGVNLPSALEFRKALYKLPDMERLLARIFSSSEASGRNANRVVLYEDASKKQLQEFILALRGCEQMAQACFSLGVILSHVKSRQLHHLLTPGKVLPDVCMDLNHFKDAFDWVEANNSGRIIPREGVDTEYDSACKAVKEIESSLLKHLKEQMKLLGSTSITYVNVGKDTYLLEVPENLSKNIPRDYELRSSRKGFFRYWSPDIKVFLRELSHAESEKESLLKSTLQRLIGRFCEHHAKWKQLVSTTAELDVLISLAIAGDYYEGPTCRPSFVGTLCTKEAPYLHAKSLGHPVLRSDTLGKGDFVPNDITIGGSDHASFILLTGPNMGGKSTLLRQVCLTVILAQVGADVPAESFDLSPVDRIFVRMGAKDNIMAGQSTFLTELSETASMLSSATCNSLVALDELGRGTATSDGQAIAESVLEHLVRKVQCRGLFSTHYHRLAVDYLKDPKVCLCHMACQVGSGIAGLDEVTFLYRLTPGACPKSYGVNVARIAGLPTSVLQKAAAKSREFEATYGKCRKVSTVTNSPNKNWVDEIAAIIQILNNAATQETICVGSLSELQDKARELMQGC 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02053 1273 SUPERFAMILY DNA repair protein MutS, domain III 641 962 IPR036187 -
Gma19g02053 1273 MobiDBLite consensus disorder prediction 37 61 - -
Gma19g02053 1273 SUPERFAMILY DNA repair protein MutS, domain II 452 653 IPR036678 GO:0005524|GO:0006298|GO:0030983
Gma19g02053 1273 Pfam MutS domain II 457 609 IPR007860 GO:0005524|GO:0006298|GO:0030983
Gma19g02053 1273 Gene3D DNA repair protein MutS, domain I 289 450 IPR016151 GO:0005524|GO:0006298|GO:0030983
Gma19g02053 1273 CDD TUDOR 91 135 IPR002999 -
Gma19g02053 1273 Pfam MutS domain V 1023 1213 IPR000432 GO:0005524|GO:0006298|GO:0030983
Gma19g02053 1273 MobiDBLite consensus disorder prediction 1 82 - -
Gma19g02053 1273 Gene3D - 638 959 - -
Gma19g02053 1273 SUPERFAMILY Tudor/PWWP/MBT 88 130 - -
Gma19g02053 1273 SUPERFAMILY DNA repair protein MutS, domain I 319 442 IPR016151 GO:0005524|GO:0006298|GO:0030983
Gma19g02053 1273 SMART DNAend 658 999 IPR007696 GO:0005524|GO:0006298|GO:0030983
Gma19g02053 1273 MobiDBLite consensus disorder prediction 1 36 - -
Gma19g02053 1273 Pfam MutS domain III 644 959 IPR007696 GO:0005524|GO:0006298|GO:0030983
Gma19g02053 1273 Gene3D - 80 140 - -
Gma19g02053 1273 MobiDBLite consensus disorder prediction 214 246 - -
Gma19g02053 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 982 1214 IPR027417 -
Gma19g02053 1273 Pfam MutS family domain IV 828 919 IPR007861 GO:0005524|GO:0006298|GO:0030983
Gma19g02053 1273 Gene3D - 804 935 - -
Gma19g02053 1273 Pfam MutS domain I 334 446 IPR007695 GO:0005524|GO:0006298|GO:0030983
Gma19g02053 1273 SMART mutATP5 1019 1211 IPR000432 GO:0005524|GO:0006298|GO:0030983
Gma19g02053 1273 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 233 1231 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Gma19g02053 1273 Gene3D MutS, connector domain 455 632 IPR036678 GO:0005524|GO:0006298|GO:0030983
Gma19g02053 1273 SMART TUDOR_7 86 144 IPR002999 -
Gma19g02053 1273 PANTHER DNA MISMATCH REPAIR PROTEIN MSH6 233 1231 - -
Gma19g02053 1273 PIRSF Msh6 2 1257 IPR017261 GO:0006298|GO:0030983
Gma19g02053 1273 MobiDBLite consensus disorder prediction 166 190 - -
Gma19g02053 1273 MobiDBLite consensus disorder prediction 144 248 - -
Gma19g02053 1273 Gene3D - 970 1246 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02053 Gma-Chr19 49452345 49462979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02053 K08737 - gmx:100811104 2383.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02053 19 49452345 49462979 Gma19g02053 19 49452345 49462979 ECH
Gma19g02053 19 49452345 49462979 Gma03g02018 03 45779418 45789538 GST