Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02030 ATGGCGGCAGAGGCGGCGTTGTTCTTTTCTGTGGCATCAGTGGTGGAGGACGTGCTTCAGCAGCACGGTCCTCGCCTCAAAGATCTTGATTTGGAATCTAGGAAAGCTGAAGAAGCTGCATCAAGAAGATATGAAGCGGCGGGGTGGTTGAGAAAAATGGTTGGAGTTGTAGCAGCCAAAGATTTACCAGCAGAGCCCTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATTATTCTCTGTAATGTTATTAATAAAGTTCAATCCGGGGCTGTTCCCAAGGTTGTGGAGAGTCCTGTTGATTCTGCATTGATCCCTGATGGGGCACCATTAACCGCATATCAGTATTTTGAAAACGTGAGGAATTTTCTGGTAGCTGTCCAAGAAATTGGAATTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCATCTAGGATTGTCAATTGCGTGTTGGCCCTGAAATCTTACAGTGAATGGAAAATGAGCGGGTCAAATGGTGTGTGGAAATTTGGTGGAAATCTCAAACCCACTGTGACTTCAAAATCTTTTGTGAGAAAAAATTCGGATCCATTTACTAATTCCTTGTCAAGGACTTCGTCGCTCAATGATAAATCTATTGCTGCTTTTAATTCTGACGTCGAGTCTATTAAAATGTCTGGTTCCCACTCTTTGAGTATGCTTGTTCGGGCAATTTTATCGGATAAGAAGCCAGAAGAAGTTCCAACTTTGGTGGAATCTGTTTTAAACAAGGTTGTAGAGGAGTTTGAGCAACGAATTGCAAGCCAAGGTGAACAGACAAAAGTAACTTCAAGAGATCCCGTTTCTCAGAGCAACGGGTCTGCTATGGCAGATAAAAAGGGGGAGAAGAAGATTCATGTGGTAACGAAAAAAGAGGATTGCATTAATAAAAATGAAGTTGCTACTATGGTAACACAAAGGCAACTTATGAAGCAGCAAATGCTCTTCGACCAGCAGCAAAGAGAAATTCAGGAGCTAAGGCATAGTCTTCACTCCACAAAAGATGGTATGCAGTTCATGCAAATGAAATTTCACGAAGACTTCTCCAATCTTGGCACGCACATTCATGGCTTAGCTAATGCTGCTTCTGGATATCATAGAGTTCTTGAAGAAAATCGCAAACTATACAATCAAGTCCAGGATCTTAAGGGAAGTATTAGGGTGTACTGTCGAGTAAGACCCTTCTTTCCTGGACAATCAAACCATTTGAGTGCAGTGGAAAATATAGAAGATGGAACCATCACAGTTAATATTCCTTCAAAGAATGGGAAGGGACGAAGGTCCTTCAACTTTAACAAAATTTTTGGACCATCTGCTACCCAAGCCGAGGTCTTCCTAGATATGCAGCCACTCGTTAGGTCTGTTCTTGATGGTTTTAATGTTTGCATATTTGCATATGGCCAAACAGGATCAGGAAAAACTTACACTATGACTGGACCCAAAGAGATCACAGAGAAAAGCCAAGGTGTAAATTACAGGGCTCTAAGTGATTTGTTTCTTATAGCAGATCAAAGGAGGGACACTGTCCACTATGACGTTTCTGTTCAAATGATTGAGATTTACAATGAGCAAGTCAGGGATCTGCTGGTCACTGATGGAACAAACAAAAGATATCCTTTTACCAAAATTCGAAGTAGTTCACAAAAAGGACTCAGCGTGCCAGATGCAAGCCTTGTCCCTGTATCATCTACTATTGATGTTATTGAACTAATGAACCTTGGTCAAAGGAACCGTGCTGTTGGAGCAACAGCCCTTAATGACCGCAGTAGCCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGGCATCTGGAGCAATCCTTCGTGGATGCATGCATTTGGTTGACTTGGCAGGAAGTGAGAGAGTGGATAAGTCTGAGGCTACAGGAGATAGACTTAAAGAAGCACAGCATATTAACAAATCTCTTTCAGCTTTGGGAGATGTCATTGCTTCCCTTGCTCAGAAAAACTCTCACGTACCTTACAGAAATAGTAAACTCACACAACTACTCCAAGATTCACTTGGAGGACAGGCTAAGACACTAATGTTTGTTCACATAAGTCCAGAGAGTGATGCTATTGGAGAAACAATTAGTACCTTAAAATTTGCTGAAAGAGTTGCCACAGTTGAACTTGGTGCTGCTCGAGTAAACAAAGATAGTGCAGATGTTAAAGAACTCAAAGAACAGATTGCCAGCCTCAAGGCAGCACTGGCAAGAAAGGAAGGAGAATCAGAACATTCTTTTTTGGGCAGCTCTGAAAAACATAGAACAAAGGCTAGTGAGCTATCACCTTATCATATAAACCAGCGAGGTCCTGACGCTGTGGATCAGCTTGGATGCCGGCAACCAATGGTTGAGGTTGGCAACATAGAACTTCGGAGTAATACCACAGTGAGGCTCAAAACTCAGAGCTTTGATTTTGATGAGATATCAGCAAATTCACCATCATGGCCCCCAGTGAACAATAGTCTTGCACAAAACTATGGGGAGGATGACAAAGAATCTGGTGGTTCTGGAGAATGGGTTGATAAGGTCATGGTCAACAAGCAAGATGTAAACAAAACTGAGAACCTCTTGGGATGTTGGCAAGCAGCAAGCAATGGGAACTTATCTGAGGCCTTTTATCAGAAATACCTCAAAGATTCTCCCAAAATGTACTCAGAACAATCCGATAATATGTTCATGGGAGCCAATCAGTTTAACATTGCCGGTTCAGATGACATGGATGAGCTTGATGCTGCAACCAGTGATTCCTCAGAACCTGACTTACTTTGGCAATTTAATCATTCCAAACTTAGCAGCGTGACCAATGGAATTGGATCAAAGACTATGAGGTCTAAGGCAGCAAAAAACAGCCCTGAGTTGAGCAAGAGTGCTGTTCATTCTTCTCCTCTAGGTCCTTCACCTTCATTGAAAAACTCAAATGGTGTCCCACATCGAACAGGGAGGCATACAGCTCCAGTTGACGTGAAACGTAGAACTGGGAGTAGAAAATAA 3039 0.4238 MAAEAALFFSVASVVEDVLQQHGPRLKDLDLESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQSGAVPKVVESPVDSALIPDGAPLTAYQYFENVRNFLVAVQEIGIPTFEASDLEQGGKSSRIVNCVLALKSYSEWKMSGSNGVWKFGGNLKPTVTSKSFVRKNSDPFTNSLSRTSSLNDKSIAAFNSDVESIKMSGSHSLSMLVRAILSDKKPEEVPTLVESVLNKVVEEFEQRIASQGEQTKVTSRDPVSQSNGSAMADKKGEKKIHVVTKKEDCINKNEVATMVTQRQLMKQQMLFDQQQREIQELRHSLHSTKDGMQFMQMKFHEDFSNLGTHIHGLANAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFFPGQSNHLSAVENIEDGTITVNIPSKNGKGRRSFNFNKIFGPSATQAEVFLDMQPLVRSVLDGFNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFLIADQRRDTVHYDVSVQMIEIYNEQVRDLLVTDGTNKRYPFTKIRSSSQKGLSVPDASLVPVSSTIDVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLASGAILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPESDAIGETISTLKFAERVATVELGAARVNKDSADVKELKEQIASLKAALARKEGESEHSFLGSSEKHRTKASELSPYHINQRGPDAVDQLGCRQPMVEVGNIELRSNTTVRLKTQSFDFDEISANSPSWPPVNNSLAQNYGEDDKESGGSGEWVDKVMVNKQDVNKTENLLGCWQAASNGNLSEAFYQKYLKDSPKMYSEQSDNMFMGANQFNIAGSDDMDELDAATSDSSEPDLLWQFNHSKLSSVTNGIGSKTMRSKAAKNSPELSKSAVHSSPLGPSPSLKNSNGVPHRTGRHTAPVDVKRRTGSRK 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02030 1012 MobiDBLite consensus disorder prediction 949 1012 - -
Gma19g02030 1012 PRINTS Kinesin heavy chain signature 468 489 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g02030 1012 PRINTS Kinesin heavy chain signature 593 610 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g02030 1012 PRINTS Kinesin heavy chain signature 624 642 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g02030 1012 PRINTS Kinesin heavy chain signature 673 694 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g02030 1012 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 395 755 IPR027417 -
Gma19g02030 1012 Gene3D Kinesin motor domain 390 764 IPR036961 -
Gma19g02030 1012 MobiDBLite consensus disorder prediction 998 1012 - -
Gma19g02030 1012 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1009 - -
Gma19g02030 1012 ProSiteProfiles Kinesin motor domain profile. 395 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g02030 1012 Pfam Kinesin motor domain 401 722 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma19g02030 1012 Gene3D - 27 184 IPR036872 -
Gma19g02030 1012 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Gma19g02030 1012 MobiDBLite consensus disorder prediction 949 994 - -
Gma19g02030 1012 CDD KISc_C_terminal 393 725 - -
Gma19g02030 1012 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Gma19g02030 1012 MobiDBLite consensus disorder prediction 264 286 - -
Gma19g02030 1012 Coils Coil 730 757 - -
Gma19g02030 1012 SMART ch_5 42 160 IPR001715 GO:0005515
Gma19g02030 1012 MobiDBLite consensus disorder prediction 264 293 - -
Gma19g02030 1012 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 1009 - -
Gma19g02030 1012 SUPERFAMILY Calponin-homology domain, CH-domain 38 172 IPR036872 -
Gma19g02030 1012 SMART kinesin_4 393 731 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02030 Gma-Chr19 49243201 49250346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02030 383 775 Calmodulin-binding Proteins AT5G65930 40.759 2.39e-75 269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02030 19 49243201 49250346 Gma19g02030 19 49243201 49250346 ECH
Gma03g01997 03 45602285 45607825 Gma19g02030 19 49243201 49250346 ECH
Gma19g02030 19 49243201 49250346 Gma03g01997 03 45602285 45607825 GST
Gma19g02030 19 49243201 49250346 Gma10g00155 10 1460697 1463006 PCT
Gma19g02030 19 49243201 49250346 Gma02g00149 02 1424792 1427388 PCT
Gma10g00155 10 1460697 1463006 Gma19g02030 19 49243201 49250346 PCT
Gma02g00149 02 1424792 1427388 Gma19g02030 19 49243201 49250346 PCT