Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02025 ATGCCCCCCTTATTTTGCAGCTACAAAAGGGCTCTCCCTCTCTGGTTTTTTTCACTCACCAAAAAGACGAAAGAAGCAAGCATGTGTGGCGGAGCAATCATCGCAGATTTCATACCTCGGCAGCGTCCCCGCACCCTCACAGCCTCCGAACTCTGGCCCAAGCGCAGCGAACCTCAACCTCAACCTCCTCCTCCTCCAGTTAAGAGGCAGAGGAAAAACCTCTACAGAGGGATCAGGCAGCGGCCCTGGGGCAAATGGGCCGCGGAGATTCGCGATCCACGTAAAGGAGTTCGTGTCTGGCTTGGCACCTTCAACACCGCCGAAGAAGCCGCCAGAGCCTACGACAAAGAAGCCCGAAAAATCCGCGGCAAGAAAGCCAAAGTCAATTTCCCCAACGAGGACGACCCTCTGCCGCAATACGGATCTTGCAAGAGCCTCAACTTGGAGTTCGGTTACGATCTCAACCAAACAGGGCTTTTCCCTTCTTCTAACGCTGATGAGAATTGCGGGTCCCACGTGGCTTACTCCGTTACGGAAGCCAACAACAAAGTAGAGAAGCTTTCCGAGGAGCTTATGGCGTACGAGAATTTAATGAGGTTTTATCAGATTCCGGAAAACGTCGTTGGGGATTTGTGGGCCTTTCCTGACACCTCTCCACCTCTCTGA 666 0.5315 MPPLFCSYKRALPLWFFSLTKKTKEASMCGGAIIADFIPRQRPRTLTASELWPKRSEPQPQPPPPPVKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFPNEDDPLPQYGSCKSLNLEFGYDLNQTGLFPSSNADENCGSHVAYSVTEANNKVEKLSEELMAYENLMRFYQIPENVVGDLWAFPDTSPPL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02025 221 MobiDBLite consensus disorder prediction 49 73 - -
Gma19g02025 221 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Gma19g02025 221 PRINTS Ethylene responsive element binding protein signature 97 113 IPR001471 GO:0003700|GO:0006355
Gma19g02025 221 SMART rav1_2 74 137 IPR001471 GO:0003700|GO:0006355
Gma19g02025 221 Gene3D AP2/ERF domain 74 132 IPR036955 GO:0003700|GO:0006355
Gma19g02025 221 Pfam AP2 domain 75 123 IPR001471 GO:0003700|GO:0006355
Gma19g02025 221 PANTHER DNA-BINDING DOMAIN 67 142 IPR044808 GO:0003700|GO:0009873
Gma19g02025 221 ProSiteProfiles AP2/ERF domain profile. 74 131 IPR001471 GO:0003700|GO:0006355
Gma19g02025 221 CDD AP2 75 132 IPR001471 GO:0003700|GO:0006355
Gma19g02025 221 Coils Coil 177 197 - -
Gma19g02025 221 PANTHER EREBP TRANSCRIPTION FACTOR 67 142 - -
Gma19g02025 221 SUPERFAMILY DNA-binding domain 74 132 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02025 Gma-Chr19 49205807 49206793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02025 28 218 AP2-EREBP Transcription Factor Family AT2G47520 48.000 6.74e-51 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma19g02025 AP2 8.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02025 K09286 - gmx:100527371 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02025 19 49205807 49206793 Gma19g02025 19 49205807 49206793 ECH