Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02019 ATGGCTTTCAAGAACTTGTCCGCTCTTACTCTCTGTGTTTCCCTTGTACTACCCTTCTTGACACCGATTTCCATAGCGGCTAATAACCGTGCAGTGGTTCCACCAGAAACCATTTGCAACTCCACCGTAAATCCTTCCTTCTGCAAAACTGTGCTTGTTAATCAAAATGGCAGCATCGTTGACTATGGTCGAATTTCTGTGCGAAAGTCCTTGTCCCAGTCCCGAAAATTCTTGAACTCGGTAAATTCATTTCTTCAAGGCAAATCCACTTTGTCTCTACCCACAATTCGAGCCCTTGAAGACTGTCAATTCCTTGCTGAACTAAACTTCGAATACTTATCAAACGCACTTGATGCTGTTGATAAAGTTAGCAATGTTCTTCCCACCAATCAAGCCGAAGATCAACAAACCCTTCTTAGTGCTGTTTTGACAAACGAAGAAACTTGTTTAGAAGGCTTGCAGCAGACCACAACTTCTGATCAAAGAGTGAAGAGTGATCTTATCTCATCACTCTCTAATGACAAAAAGCTCCACAGTGTTTCTCTTGGCTTGTTCACCAAGGGTTGGGTGCCTGAGAAGAAAATCTCAACATCATGGAAAACCAATGGGAGACATTTGGGTTTCCGCAATGGTCGTTTACCATTGAAGATGTCAAACCGTGTACGTGCCATTTATGATTCTGCTAGAGGTCACGGGAGAAAACTACTTCAAGATAACAGCCAAAGTGTGTTGGTTAGGGACATTGTGGTTGTTAGCCAGGATGGAAGCGGAAACTTCACCACTATCAATGATGCCATAGCAGCTGCGCCAAATAACACAGTTGCTAGTGATGGCTACTTTTTAATTTTTGTCACTCAAGGTGTGTATCAAGAATATATATCCATAGCTAAAAACAAAAAGAACTTGATGATGGTTGGAGATGGGATCAATCAAACGATTATCACCGGTGATCACAATGTTGTCGATAATTTCACAACATTCAACTCAGCAACATTTGCTGTGGTCGCACAAGGGtttgtagcagttaacataacattccgaaacactgctgggccaaCACAAGGCAGAACAGACCCAAATCAAAACACAGGCACTTCCATACATAATGCCACTATAAAACCTGCTGCTGATTTGGCTCCTTCAGTTGGCATTGTGAAAACGTACCTTGGGAGACCATGGAAAGAGTACTCAAGAACGGTTTATATGCAGTCTTTCATGGACAGTTTCATAAATCCTTCTGGTTGGCGTGAATGGAGTGGAGATTTTGCCCTAAGCACCTTGTACTATGCAGAATATAATAATACGGGACCTGGTTCAAACACCACAAACAGAGTGACGTGGCCTGGTTATCATGTTATCAATGCTACTGATGCGGCTAATTTTACCGTGTCTAACTTCTTGGACGGAGATAATTGGCTGCCTCAAACTGGAGTTCCATACATTAGTGGATTGATATAG 1458 0.4108 MAFKNLSALTLCVSLVLPFLTPISIAANNRAVVPPETICNSTVNPSFCKTVLVNQNGSIVDYGRISVRKSLSQSRKFLNSVNSFLQGKSTLSLPTIRALEDCQFLAELNFEYLSNALDAVDKVSNVLPTNQAEDQQTLLSAVLTNEETCLEGLQQTTTSDQRVKSDLISSLSNDKKLHSVSLGLFTKGWVPEKKISTSWKTNGRHLGFRNGRLPLKMSNRVRAIYDSARGHGRKLLQDNSQSVLVRDIVVVSQDGSGNFTTINDAIAAAPNNTVASDGYFLIFVTQGVYQEYISIAKNKKNLMMVGDGINQTIITGDHNVVDNFTTFNSATFAVVAQGFVAVNITFRNTAGPTQGRTDPNQNTGTSIHNATIKPAADLAPSVGIVKTYLGRPWKEYSRTVYMQSFMDSFINPSGWREWSGDFALSTLYYAEYNNTGPGSNTTNRVTWPGYHVINATDAANFTVSNFLDGDNWLPQTGVPYISGLI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02019 485 Pfam Pectinesterase 249 353 IPR000070 GO:0030599|GO:0042545
Gma19g02019 485 Pfam Pectinesterase 354 470 IPR000070 GO:0030599|GO:0042545
Gma19g02019 485 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 186 IPR006501 GO:0004857
Gma19g02019 485 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 187 IPR035513 -
Gma19g02019 485 Gene3D - 355 485 IPR012334 -
Gma19g02019 485 Gene3D - 247 354 IPR012334 -
Gma19g02019 485 CDD PMEI-like_3 37 189 - -
Gma19g02019 485 PANTHER PECTINESTERASE 16 353 - -
Gma19g02019 485 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 187 IPR035513 -
Gma19g02019 485 PANTHER PECTINESTERASE 353 483 - -
Gma19g02019 485 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 353 483 - -
Gma19g02019 485 SUPERFAMILY Pectin lyase-like 246 483 IPR011050 -
Gma19g02019 485 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 16 353 - -
Gma19g02019 485 Pfam Plant invertase/pectin methylesterase inhibitor 36 182 IPR006501 GO:0004857
Gma19g02019 485 SMART PMEI_2 30 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02019 Gma-Chr19 49156773 49158685 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02019 354 485 Carbohydrate Esterase AT1G02810 78.030 3.03e-68 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02019 K01051 - gmx:100813051 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02019 19 49156773 49158685 Gma03g01988 03 45532993 45535137 GST
Gma19g02019 19 49156773 49158685 Gma10g00164 10 1529009 1533308 PCT
Gma19g02019 19 49156773 49158685 Gma02g00159 02 1515643 1520376 PCT