Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g02018 ATGGCTTTCAATAGCTTGTACTTTCGTATACTCTGTGTTTCCCTTGTGCTATCCTTCTTGACATCCATTTCCATAGCTGATAATAACCATGAAGCCGTTCCACCAGAAACCATATGCTACTCAACCTTAGACCCTTCTTACTGCAAATCTGTGCTTGCTAATCAAAATGGCAGCATATATGACTATTGCCGCATTTCTGTTCGAAAGTCATTGTCTCAGTCTCGTAAGTTCTTGAACAACATGTATTCATATCTTCAACATCCTTCTTCTTATTCTCAACCCACAATTCGTGCTCTTGAGGATTGTCAATTCCTTGCTGAATTAAACTTTGAATACTTATCAACAACACGTGGCACTGTTGATAAAGCCAGCGATGTTCTTCCCACCTCTCAAGCCAGCGATGTTCACACATTGCTTAGTGCTGTTTTGACAAATCAACAAACTTGTTTAGATGGCCTTCAAACTTCAGCTTCAGATTCAAGAGTGAAGAATGATCTTTCTTCCCAACTCTCGGAAAATGCAAAGCTTGACAGTGTCTCGCTTTATTTGTTCACCAAGGCCTGGGATTCTGAGAACAAAACTTCAACATCATGGCAGCACCAGAATGAACGTTTACCCTTGAAGATGCCAAACAAAGTACGTGCCATTTATGATTCCGCGAGAGGCCAGGGGAAAAAACTACTTCAAACAATGGATGATAATGAAAGCGTACTTGTGAGTGATATTGTGGTGGTTAGTAAGGATGGAAGCGGGAACTTTATCACTATCAATGATGCCATAGCTGCTGCACCAAATAACACAGCTGCCACCGATGGCTACTTCATTATTTTTATCGCCGAGGGTGTATATCAAGAGTACGTATCTATAGCCAAAAGCAAGAAGTTCTTGATGCTAATTGGAGATGGAATCAATCGGACAATCATCACTGGCGATCACAACGTTGTTGATGGCTTTACAACATTTAACTCAGCCACATTCGCTGTGGTAGCACAAGGAtttgtggcaatgaacataacattccgcaacacagctgggccaagcaagcaccaagcagttgcagtaagaaatggagcggatatgtccaccttctacagctctgttgttttacaaaactgcaACATGTATCCCCGCCTCCCCATGAGTGGACAATTCAATGCCATCACTGCACAAGGTCGAACTGATCCAAATCAAAACACTGGCATTTCCATACAAAATGCGACCATAAAAGCAGCACAGGATCTGGCTCCCGTGGTTGGTACTGTGGAAACATTCCTTGGGAGGccatag 1287 0.3815 MAFNSLYFRILCVSLVLSFLTSISIADNNHEAVPPETICYSTLDPSYCKSVLANQNGSIYDYCRISVRKSLSQSRKFLNNMYSYLQHPSSYSQPTIRALEDCQFLAELNFEYLSTTRGTVDKASDVLPTSQASDVHTLLSAVLTNQQTCLDGLQTSASDSRVKNDLSSQLSENAKLDSVSLYLFTKAWDSENKTSTSWQHQNERLPLKMPNKVRAIYDSARGQGKKLLQTMDDNESVLVSDIVVVSKDGSGNFITINDAIAAAPNNTAATDGYFIIFIAEGVYQEYVSIAKSKKFLMLIGDGINRTIITGDHNVVDGFTTFNSATFAVVAQGFVAMNITFRNTAGPSKHQAVAVRNGADMSTFYSSVVLQNCNMYPRLPMSGQFNAITAQGRTDPNQNTGISIQNATIKAAQDLAPVVGTVETFLGRP 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g02018 428 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 14 366 - -
Gma19g02018 428 PANTHER PECTINESTERASE 14 366 - -
Gma19g02018 428 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 366 428 - -
Gma19g02018 428 CDD PMEI-like_3 37 188 - -
Gma19g02018 428 Gene3D - 237 366 IPR012334 -
Gma19g02018 428 Gene3D - 367 428 IPR012334 -
Gma19g02018 428 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 186 IPR035513 -
Gma19g02018 428 PANTHER PECTINESTERASE 366 428 - -
Gma19g02018 428 Pfam Plant invertase/pectin methylesterase inhibitor 36 174 IPR006501 GO:0004857
Gma19g02018 428 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 174 IPR006501 GO:0004857
Gma19g02018 428 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 187 IPR035513 -
Gma19g02018 428 SMART PMEI_2 30 183 IPR006501 GO:0004857
Gma19g02018 428 Pfam Pectinesterase 243 365 IPR000070 GO:0030599|GO:0042545
Gma19g02018 428 SUPERFAMILY Pectin lyase-like 239 428 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g02018 Gma-Chr19 49152547 49154049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g02018 6 428 Carbohydrate Esterase AT4G02330 47.708 1.96e-137 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g02018 K01051 - gmx:100792847 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02018 19 49152547 49154049 Gma19g02018 19 49152547 49154049 ECH
Gma19g02018 19 49152547 49154049 Gma03g01987 03 45529292 45531257 GST