Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma19g02014 | ATGACTACGGAACCAGACGTTGAATCCAAGTATGCCCACAACGGCAAGGTCATGGTGGGCACCGCCATTCTCCTCTTCATTCTCATAATAATCATTATTTTCTTCCACACCTACGTCCGCTTCTGCCGCCGTCGCCGCCGCTTCTCTCATTCGCTTCCGACCAATTCCTCCGCCGCCGCCTCTCTCGACGACCCGTGCCTCGACCCTTCCATCATCAAGTCCCTTCCCACTTTTACTTTCTCCGCCGCCACCCACCGCTCTCTCCAGGACTGCGCCGTGTGCTTATCGGAGTTCTCCGACGGCGACGAGGGCCGCGTGCTCCCGAATTGTAAGCACTCTTTCCACGCTCATTGCATCGACACGTGGATCGGGTCGCACTCCACGTGTCCTCTCTGCCGAACCCCGGTCAAACCGGTCACGGGTTCTTCCGACACTGAACCGGGTTCGGTTTCGGTTTCCGAAGCGGGTGAGGGTTGCTCCTCTTCGTCTTTGCCTCCGCCAATTGGGTGCCCGAGAAAGCCGTTGGGTATAAATATAATCGTAGAGATTCCAGAGGTGGAAAGAGGGTCGGATTCTGTAACCGGAGATCAAGGGTTCAGATGGTCATTGAAGAGGTTTTGCAATGTTTAA | 630 | 0.5556 | MTTEPDVESKYAHNGKVMVGTAILLFILIIIIIFFHTYVRFCRRRRRFSHSLPTNSSAAASLDDPCLDPSIIKSLPTFTFSAATHRSLQDCAVCLSEFSDGDEGRVLPNCKHSFHAHCIDTWIGSHSTCPLCRTPVKPVTGSSDTEPGSVSVSEAGEGCSSSSLPPPIGCPRKPLGINIIVEIPEVERGSDSVTGDQGFRWSLKRFCNV | 209 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma19g02014 | 209 | PANTHER | RING-H2 FINGER PROTEIN ATL64 | 8 | 155 | - | - | |
Gma19g02014 | 209 | SUPERFAMILY | RING/U-box | 71 | 141 | - | - | |
Gma19g02014 | 209 | CDD | RING-H2_PA-TM-RING | 90 | 133 | - | - | |
Gma19g02014 | 209 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 67 | 141 | IPR013083 | - | |
Gma19g02014 | 209 | MobiDBLite | consensus disorder prediction | 139 | 167 | - | - | |
Gma19g02014 | 209 | Pfam | Ring finger domain | 90 | 133 | IPR001841 | - | |
Gma19g02014 | 209 | MobiDBLite | consensus disorder prediction | 139 | 160 | - | - | |
Gma19g02014 | 209 | SMART | ring_2 | 91 | 132 | IPR001841 | - | |
Gma19g02014 | 209 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE | 8 | 155 | - | - | |
Gma19g02014 | 209 | ProSiteProfiles | Zinc finger RING-type profile. | 91 | 133 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma19g02014 | Gma-Chr19 | 49122770 | 49123952 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma19g02014 | 11 | 145 | Rapid Response to Elicitors | AT3G16720 | 44.000 | 1.32e-37 | 130 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma19g02014 | - | - | gmx:100800433 | 410.609 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma19g02014 | 19 | 49122770 | 49123952 | Gma19g02014 | 19 | 49122770 | 49123952 | ECH | |
Gma19g02014 | 19 | 49122770 | 49123952 | Gma03g01983 | 03 | 45505179 | 45506267 | GST |