Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01981 ATGGTGGAAAGGAGGAGAAAGCCTCTGATACTGTGTTCCACCAAACATCTCATAAATTCCACTGTTCCAACCAACAACCTCTTCCCCCATGAATCTCTTCCCACTTTCCGTTTACCCGTTGGGATTCTCCGATTCTCCAACCCCGCAAACCCCTCTCTCGACCACTCTGCACTTCTCGCTCTCTCCACTAGTCTTCTCAAAACCCTCTCCATCACTTCAGGCTCTCCGGTTTTGGTCAAGAATGTTGATACGAATACACAGAAAATTGCAGTGGCTATTGCTCTTGATCCACCAGGCACCGCCACTAATATGGACTCACCCTCTTCTTCAAATTCTCGAATAATGCTTGTTTTTCCTTCTTGTGATTTCCCTTCTAGTGGTTCTGTGTTAGATGATCAAGTAGCTTATATATCTCCTCTTTTAGCCTTTAACCTTAACTTGCACGTGACATGCTTAAAATCTATTCTTCACCACGGGCAAGATGCTTTAGCTTCTTATTTCAAAAGGGGTGATGAGGATGCCACTAAAAGCACTGTGGATTTTGTTATCAACGTAGAATTGGAACCACTTGCTCAACCTCCAAAATTTGCCTCTCTCCTGAGGGTTTCTTTTGTGAAGATACCTGAATGTGGCATCCTTGAATCCATTAGAGCAAGTTCGCCTGTTGAGTCACAAGAGCGGCAAGACATGATCGACTTGGAGTTGCAAAAGTACTTTGAAGTCGATAGGTATTTGTCGAAGGGAGATGTTTTTGGAATTAAAATAAGCTGGAACTGCAATTCCCCCATTTGCATTCCTTGCAATCAAAGATCATTAAATAAAAATGACAACCTTGTCTGCTTCAAGGTTGTTGGTATGGAACCTTCAGATGAGCCGGTTTTCCGTGTCAATAACACCTTAACTGCTCTTGTGCTGGTAGGGAGTTCTCCATCCGCACTCCCTCCAGATTTGTTGATTGGTGGACAAGCAGAAGGACCTGTGCCTTTGCAAGGGGACACTGTGAACATCTTGGCTTCAATACTTACACCAACTTTTTGTCCGTCAGTGCTTTCTTCCAAGTTTAGAGTTTCAGTTCTATTGTATGGCTTGGCAGggtgtgggaaaaggactgttgttagatatgttgctcgtcaactgggcgtgcatgtggtggaatataactgtcatgatctaatggtgtctgataggcaatctgttgctttagcacaagctttcaagacagctcgaagATACTCACCAGCAATACTTCTTCTTCGTCATTTTGATGTTTTTCGTGATTCACAATCGCCTGAGGTTTCACCACATGACCAAAGAGGAAATACATCTGAAGTTGCATCAGTTATTAGGAAATTCACTGAGCCAGTCAATGAACATGGTGATAGTAGTGTCCCAGGGAAATCAAACAGTGAATCTGTGGAGAAGAATGCTGAAAAGACAAGTGGGCATCAGGTCCTATTGATTGCTGCTGCAGACAGTTCAGAAGGTCTGCCTTCGACTATCAGACGCTGTTTTAGCCACGAAATAAGCATGGGGGCTTTGACTGAAGAGCAAAGGGCTGAAATGCTATTCCAGTCACTGCAAAGTGTTTCCGGACTCCTCTCTAATACTAATTCAGAAGCTTTAGTAAAAGAAATAGTTGGGCAGACATCTGGTTACATGCCCAGGGATATATGTGCTTTAATTGCTGATGCTGGTGCCAACTTATTTCCCAGAAACAATGCTAAAGTAGACAAAGATGTACATGATGATGTAGGTAGTTCCCTTAGTTCCAAGATGGCAGAGGACAACAATCACGGGAAAGTTTCACCTCAGATTACTGGAAAAGAAGACTTGTTGAATGCTTTGGAACGATCAAAGAAAAGAAATGCATCAGCATTGGGTACTCCAAAGGTTCCGAATGTGAAATGGGAGGATGTTGGTGGGCTTGAAGATGTCAAAAAATCAATTCTGGATACTGTTCAGTTACCTCTCCTGCATAAAGATCTATTTTCATCTGGATTACGTAAGCGATCTGGTGTTCTTTTGTATGGTCCCCCTGGAACTGGCAAAACATTATTAGCAAAAGCTGTTGCTACAGAGTGCTCCTTAAATTTTCTTAGTGTGAAAGGTCCTGAACTGATCAACATGTACATTGGAGAGTCTGAAAAGAATGTTCGAGACATTTTCCAGAAGGCCAGATCAGCACGTCCATGTGTCATCTTCTTTGATGAGCTTGATTCTCTTGCACCAGCTCGAGGTGCCTCTGGAGATTCTGGGGGTGTTATGGACAGAGTGGTTTCTCAGATGCTTGCAGAGATTGATGGGTTAAGTGATTCCACACAGGATCTGTTTATTATAGGTGCAAGTAATAGACCAGATTTGATAGACCCAGCACTTCTGCGCCCTGGTCGATTTGACAAACTGCTATATGTCGGAGTTAACTCCGATGCATCTTACAGGGAGCGGGTCCTGAAAGCTCTTACCCGAAAGTTCAAATTGCATGAAGATGTCTCACTTTACTCCATAGCAAAAAAATGTCCACCAAACTTCACTGGTGCAGACATGTATGCTTTGTGTGCAGATGCTTGGTTCCATGCTGCAAAGCGCAAAGTTTTGAGAGCAAATCCAGAGTCTTCCAGCCAAGATAATGAAGCAGATTCTGTTGTTGTGGAATACAATGATTTCATCCAGGTCTTAGAAGAGCTGTCGCCTTCCCTCTCCATGGCTGAGCTCAACAAGTACGAGCAACTGAGAGATCAGTTTGAAGGCACCTCTAAATGA 2760 0.4116 MVERRRKPLILCSTKHLINSTVPTNNLFPHESLPTFRLPVGILRFSNPANPSLDHSALLALSTSLLKTLSITSGSPVLVKNVDTNTQKIAVAIALDPPGTATNMDSPSSSNSRIMLVFPSCDFPSSGSVLDDQVAYISPLLAFNLNLHVTCLKSILHHGQDALASYFKRGDEDATKSTVDFVINVELEPLAQPPKFASLLRVSFVKIPECGILESIRASSPVESQERQDMIDLELQKYFEVDRYLSKGDVFGIKISWNCNSPICIPCNQRSLNKNDNLVCFKVVGMEPSDEPVFRVNNTLTALVLVGSSPSALPPDLLIGGQAEGPVPLQGDTVNILASILTPTFCPSVLSSKFRVSVLLYGLAGCGKRTVVRYVARQLGVHVVEYNCHDLMVSDRQSVALAQAFKTARRYSPAILLLRHFDVFRDSQSPEVSPHDQRGNTSEVASVIRKFTEPVNEHGDSSVPGKSNSESVEKNAEKTSGHQVLLIAAADSSEGLPSTIRRCFSHEISMGALTEEQRAEMLFQSLQSVSGLLSNTNSEALVKEIVGQTSGYMPRDICALIADAGANLFPRNNAKVDKDVHDDVGSSLSSKMAEDNNHGKVSPQITGKEDLLNALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFKLHEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLRANPESSSQDNEADSVVVEYNDFIQVLEELSPSLSMAELNKYEQLRDQFEGTSK 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01981 919 MobiDBLite consensus disorder prediction 583 604 - -
Gma19g01981 919 Gene3D - 334 529 IPR027417 -
Gma19g01981 919 Gene3D - 807 893 - -
Gma19g01981 919 PANTHER PEROXISOME ASSEMBLY FACTOR 2 37 915 - -
Gma19g01981 919 MobiDBLite consensus disorder prediction 589 603 - -
Gma19g01981 919 CDD AAA 348 418 - -
Gma19g01981 919 ProSitePatterns AAA-protein family signature. 776 794 IPR003960 GO:0005524|GO:0016887
Gma19g01981 919 Pfam ATPase family associated with various cellular activities (AAA) 358 509 IPR003959 GO:0005524|GO:0016887
Gma19g01981 919 Pfam ATPase family associated with various cellular activities (AAA) 673 805 IPR003959 GO:0005524|GO:0016887
Gma19g01981 919 SMART AAA_5 354 514 IPR003593 -
Gma19g01981 919 SMART AAA_5 669 809 IPR003593 -
Gma19g01981 919 MobiDBLite consensus disorder prediction 455 478 - -
Gma19g01981 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 328 582 IPR027417 -
Gma19g01981 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 632 913 IPR027417 -
Gma19g01981 919 CDD AAA 667 805 - -
Gma19g01981 919 Gene3D - 631 908 IPR027417 -
Gma19g01981 919 PANTHER AAA-FAMILY ATPASE 37 915 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01981 Gma-Chr19 48866382 48873262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01981 639 864 Calmodulin-binding Proteins AT3G56690 39.648 5.12e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01981 K13339 - gmx:100820183 1781.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01981 19 48866382 48873262 Gma03g01941 03 45233014 45237850 GST
Gma10g00439 10 4239372 4239797 Gma19g01981 19 48866382 48873262 PCT
Gma13g01145 13 25639190 25639967 Gma19g01981 19 48866382 48873262 PCT