Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01952 ATGAAGATGAGATTTTTCCTTGTAGCTTGTTTGTTCTGCATCCTAGAGGTTTGCCAAGGAGGCAACCTCAGAAAGCAATTCTACAAGAAAACCTGTCCTCAAGCCGAGCAGATTGTCAGAACAAAAATCCAGGAACATGTCTCTGGAAGGCCTGATTTGCCTGCCAAGTTGATTAGAATGCATTTTCATGACTGTTTTGTCAGGGGTTGTGATGGTTCGGTTTTGCTGGACTCCACTGCCACCAACACTGCAGAGAAGGATGCCATTCCCAATTTATCTTTGGCTGGCTTTGATGTCATAGATGAAATAAAAGAAGCATTGGAGGAAAAAATGGACGCTGTTGCCGTCAAATTTAATAAGCCAATGTGGGAAGTGCTTACCGGTAGAAGAGATGGCAGAGTATCCATAAGTGGTGAAACCTTAGCCAATCTGCCAGCACCTTTCTTCAATTTCACCCAGCTCAAACAAAGCTTTGCTAGTAAAGGGCTTACTGTGCATGACTTGGTTGTGTTATCAGGAGCACACGCAATTGGGATAGGTCATTGTAACTTATTCAGTAACAGGCTTTTCAACTTCACTGGAAAAGGTGATCAAGATCCTTCTTTGAATCCTACTTATGCCAACTTTTTGAAGACAAAATGCCAAGGTCTCAGTGACACCACCACAACAATAGAGATGGATCCTAACAGCTCAAACACCTTTGACCGTGACTATTATTCTATCCTTCGCCAGAACAAGGGTCTATTCCAATCAGATGCTGCCCTTTTAACAACTAAGATATCAAGAAACATTGTCAACGAATTGGTTAAACAAAACAAGGAGAAAGTGCTCTGTTGTCAACTCTTAATTAAGAGCTGTTTTCTGGTTTTAATTTGGACGGGATCAGGAGCTTTCGTCTTTCTCCCTGTAGAGCATGCGAATGGAGGAGGAACAAACTAG 939 0.4217 MKMRFFLVACLFCILEVCQGGNLRKQFYKKTCPQAEQIVRTKIQEHVSGRPDLPAKLIRMHFHDCFVRGCDGSVLLDSTATNTAEKDAIPNLSLAGFDVIDEIKEALEEKMDAVAVKFNKPMWEVLTGRRDGRVSISGETLANLPAPFFNFTQLKQSFASKGLTVHDLVVLSGAHAIGIGHCNLFSNRLFNFTGKGDQDPSLNPTYANFLKTKCQGLSDTTTTIEMDPNSSNTFDRDYYSILRQNKGLFQSDAALLTTKISRNIVNELVKQNKEKVLCCQLLIKSCFLVLIWTGSGAFVFLPVEHANGGGTN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01952 312 CDD secretory_peroxidase 22 268 IPR033905 GO:0004601|GO:0042744
Gma19g01952 312 ProSiteProfiles Plant heme peroxidase family profile. 22 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma19g01952 312 Gene3D - 26 144 - -
Gma19g01952 312 Gene3D Peroxidase, domain 2 145 273 - -
Gma19g01952 312 Pfam Peroxidase 39 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma19g01952 312 PANTHER PEROXIDASE 25-RELATED 5 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma19g01952 312 SUPERFAMILY Heme-dependent peroxidases 23 271 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma19g01952 312 PRINTS Plant peroxidase signature 241 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma19g01952 312 PRINTS Plant peroxidase signature 225 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma19g01952 312 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma19g01952 312 PRINTS Plant peroxidase signature 166 178 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma19g01952 312 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma19g01952 312 ProSitePatterns Peroxidases proximal heme-ligand signature. 167 177 IPR019793 -
Gma19g01952 312 PANTHER PEROXIDASE 5 274 - -
Gma19g01952 312 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma19g01952 312 PRINTS Haem peroxidase superfamily signature 119 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma19g01952 312 PRINTS Haem peroxidase superfamily signature 167 182 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma19g01952 312 PRINTS Haem peroxidase superfamily signature 227 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01952 Gma-Chr19 48647821 48650120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01952 23 255 Peroxidase AT4G11290 52.610 1.30e-89 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01952 K00430 - gsj:114405310 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01952 19 48647821 48650120 Gma19g01952 19 48647821 48650120 ECH
Gma19g01952 19 48647821 48650120 Gma03g01915 03 45026165 45028079 GST
Gma19g01952 19 48647821 48650120 Gma10g00215 10 1987418 1989404 PCT
Gma19g01952 19 48647821 48650120 Gma02g01382 02 15977759 15979399 PCT
Gma10g00215 10 1987418 1989404 Gma19g01952 19 48647821 48650120 PCT
Gma02g01382 02 15977759 15979399 Gma19g01952 19 48647821 48650120 PCT