Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01941 ATGTCGATATTATCAAGCATGGACATGCCTACCATTGATGTGGACCTTGGGCCTGAAAAGCTTGAAGATGAGAAACAGGGAGGTCCCTTGTTGCATTGTGATCTTTGTGATACAGAAGTAGTTCACAAGTTGGCTCAAATGTTCCTTCCAGGTCTAGCCAGTGCTTGTGTTGATAACACATCGGGAGATCTCTTCAAGACTCCGGGTTCAGTGGCTGTTGATTTGAGGAAGGAAATGATAGAGTATGTTACCCAAAGAAGTGAATCATTTGTTGCTGAGTCTGTTATCTTGGAAGGTGGTCCAGACGGTGAAGAATCAGACCATCCTTTTGATATCATTTCTGATTTCGTTGATGACTTTGTGAGTTCAAAGAGGAATCTGTTTAGTCGAGTTTCGGGATGGTTGCTGAGTGAAAAGAGGGAAGACAGAATAGATGATTTTGTTCAAGAGATGGAAATGAATGGGTTTTGGACACTTGACAGGAGAGAAACAATTGCAGAAACTTTGCTCAAGAATGTTGACTTTGAGAACTCATATCATTGCAACATGAGTTTTAATTCTGCTGAAGAACTTGTCAATCATGTTGATAACTGCAACTTTAGAACTATGATATGTGAAAATGAGGGATGCAATTCCAGATTTTGTGCAGCTCATTTGAAGAATCATGATTCAACTTGTCCTTTCAAGATAATTCCATGTGAACAGAAGTGTTCTGATTGCATTATGAGACGTGAGATGGATAGGCATTGTATAACTATTTGTCCAATGAAGCTTGTAAATTGTCCTTTTTATGTTGTGGGTTGTAGGTCAGCTGTTGCACAATGTATGATTGAAAAACATCGTTTAGATGACGTTCATTCTCACTTGTGGCACTTACTTAAAGGCATCTACAAGCAAGCATATGGGGATGATCTTAAACGACGAGTGGAGCAAATTGTACAGGCATCATCAAGCAGCCGTTTAGCAGAGGCTCGGGATGTTAGATCTTTAAACTTCATTGTCAAGGACATTGAAGCTAAGTTAGGACCTTTCAAAGTGAGTGTTTTGGAGAAAAATAATGCAGAGATTGTTACCAAGAATGACGAAGGGGAAGCTGGTGACACTGAAAAGAGCATGAAGGCTTCAGATATGGTCAATTCACCAGATAAAGCTGAATTGAGTGACATGAAAAATATGAATAATGCAAAGAGTACTACCAAGAATGAAGATAGGGAACCTGTTCCTGTTGAAAATAAAGGTTGTGAAGAGATGGCACAAACTTCAAACACGACAAATTTATCTGATAAAACTGAAGTTGGCCTCCCGAATGATGAGAACAAAGATGCTGCAGCTAGTGAATTAAAAATCAAGGGGGACGAAGAGCACACTCAAACACATAAGGAAAAATTATCAAATGAAGAAGTTAGTGCCCCAGATGAGGGCAGTGCAGAGAATATCATCAAAAGCAAATGTAATGAAGACAATAAATTTGAAGATAAAGACAACGAACAAAGCATACAAAATTCAAAAATGGAAACCAAGGGTGGTTTAGAGAATAATGTTAAGAACAAAGATGGTGACTTAAAAAAGAGCGCACAGACTTCAGACGGGTAA 1593 0.3886 MSILSSMDMPTIDVDLGPEKLEDEKQGGPLLHCDLCDTEVVHKLAQMFLPGLASACVDNTSGDLFKTPGSVAVDLRKEMIEYVTQRSESFVAESVILEGGPDGEESDHPFDIISDFVDDFVSSKRNLFSRVSGWLLSEKREDRIDDFVQEMEMNGFWTLDRRETIAETLLKNVDFENSYHCNMSFNSAEELVNHVDNCNFRTMICENEGCNSRFCAAHLKNHDSTCPFKIIPCEQKCSDCIMRREMDRHCITICPMKLVNCPFYVVGCRSAVAQCMIEKHRLDDVHSHLWHLLKGIYKQAYGDDLKRRVEQIVQASSSSRLAEARDVRSLNFIVKDIEAKLGPFKVSVLEKNNAEIVTKNDEGEAGDTEKSMKASDMVNSPDKAELSDMKNMNNAKSTTKNEDREPVPVENKGCEEMAQTSNTTNLSDKTEVGLPNDENKDAAASELKIKGDEEHTQTHKEKLSNEEVSAPDEGSAENIIKSKCNEDNKFEDKDNEQSIQNSKMETKGGLENNVKNKDGDLKKSAQTSDG 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01941 530 MobiDBLite consensus disorder prediction 359 530 - -
Gma19g01941 530 MobiDBLite consensus disorder prediction 397 411 - -
Gma19g01941 530 MobiDBLite consensus disorder prediction 433 468 - -
Gma19g01941 530 MobiDBLite consensus disorder prediction 510 530 - -
Gma19g01941 530 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 221 286 IPR013083 -
Gma19g01941 530 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 4 387 IPR043211 -
Gma19g01941 530 MobiDBLite consensus disorder prediction 415 432 - -
Gma19g01941 530 Pfam TRAF-type zinc finger 222 280 IPR001293 GO:0008270
Gma19g01941 530 PANTHER NEUROFILAMENT HEAVY POLYPEPTIDE-LIKE 4 387 - -
Gma19g01941 530 MobiDBLite consensus disorder prediction 479 500 - -
Gma19g01941 530 ProSiteProfiles Zinc finger TRAF-type profile. 222 269 IPR001293 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01941 Gma-Chr19 48552265 48556472 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01941 - - gmx:100799182 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01941 19 48552265 48556472 Gma18g00327 18 2720018 2725702 ECH
Gma19g01941 19 48552265 48556472 Gma11g02254 11 37858618 37863752 ECH
Gma19g01941 19 48552265 48556472 Gma19g01941 19 48552265 48556472 ECH
Gma19g01941 19 48552265 48556472 Gma03g01900 03 44907490 44912657 GST
Gma19g01941 19 48552265 48556472 Gma02g01554 02 31031601 31034668 PCT
Gma02g01554 02 31031601 31034668 Gma19g01941 19 48552265 48556472 PCT