Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01938 ATGATGGCAGCTACTAGAATGGATAATAAGAGGAGACCGAGTATTAATTTTGAGACCTTCACGTGGAAAATTGAAAATTTCTCTAGACAGAACACCAATAAACTAAAATCCAAGGCTTTCCAAATCCGAGGTTATAAATGGCAGATTCGTTTGTATCCATTAGTGAAAAATGTTGACCATTTTTCATTACGTTTGATGGTTGCGGATTCTTTACCACCGTATGGATGGGACAGAAATACGTATTTCAAGTTGGCTCTAATTAATCAATTGGATGGCAGTAAATCAGTGGTAAAAGAGACTGAACAGAAGTTCAAAGGTGGATTTCGTGAGTGGGGCTCATTTTTTGTGAATGTTAGTGACTTCTATGACCCTAAACAAGGCTATCTTGTGAATGATACATGCATCATTGAAGCTCATGTTTGTGTCTCTGATCTTAGCACTCTTCAAGCTAACAACTTGAACATAATTACTCCAACCAACGACCTTAAATTTGGTGATCAATCAGCAAGACATTCAGAAACATCAGAAGGGGAAGTTCAAGGTTCAGATTTGACACTAAGGGACCTTCTAGATTTGGAGTGCTTAGCAAAAGAAGGAGCAGATTTTGTTCCACTGTTGGAAGAGGCATGCATATGGCATCCTTCCCTGATAAGGAGCCAGAGTAAAAGTTCTAAACTGTTCAAACAATGGGCATTCACATCTTTGGGTGAAGTTCTGCATGTACTCAAGATAAGTAAGGTGAAGGATATGAATGAAGATGCATTCAATCACCTTCAAGGTTTATGGGAGGAACTTGTTAAGCGGTCCGGATTTCAATTGTCTTGGTTGGAGCCTTATGTTCAATCTGCATTGGCTATGAAAGCTCAGGTGGAAAAAGCAGCTGAAGTGAATAAACTCAAAGACAATGTGGTTGATTTGGAGGTTAAAATGAAGAAGTTGAGGGGAGAGTTGAAAGCTGCAGAAGCTGAGTTTGAGGTAGCAAGGAGAGCCTTGGCTGAGGCAAGAAAAGGTTTCATAGAGATAGAGGTGGATTTGAATGCTGAATTAGGCTATGCCATGTTTTAA 1065 0.3953 MMAATRMDNKRRPSINFETFTWKIENFSRQNTNKLKSKAFQIRGYKWQIRLYPLVKNVDHFSLRLMVADSLPPYGWDRNTYFKLALINQLDGSKSVVKETEQKFKGGFREWGSFFVNVSDFYDPKQGYLVNDTCIIEAHVCVSDLSTLQANNLNIITPTNDLKFGDQSARHSETSEGEVQGSDLTLRDLLDLECLAKEGADFVPLLEEACIWHPSLIRSQSKSSKLFKQWAFTSLGEVLHVLKISKVKDMNEDAFNHLQGLWEELVKRSGFQLSWLEPYVQSALAMKAQVEKAAEVNKLKDNVVDLEVKMKKLRGELKAAEAEFEVARRALAEARKGFIEIEVDLNAELGYAMF 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01938 354 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 17 333 - -
Gma19g01938 354 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 4 147 IPR008974 GO:0005515
Gma19g01938 354 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 17 333 - -
Gma19g01938 354 SUPERFAMILY TRAF domain-like 19 143 - -
Gma19g01938 354 Pfam MATH domain 24 141 IPR002083 GO:0005515
Gma19g01938 354 ProSiteProfiles MATH/TRAF domain profile. 17 140 IPR002083 GO:0005515
Gma19g01938 354 CDD MATH 19 140 IPR002083 GO:0005515
Gma19g01938 354 Coils Coil 296 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01938 Gma-Chr19 48536858 48538460 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01938 - - gmx:102668571 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01938 19 48536858 48538460 Gma03g01897 03 44887745 44889844 GST
Gma19g01938 19 48536858 48538460 Gma10g01176 10 33686508 33713340 PCT
Gma19g01938 19 48536858 48538460 Gma20g00704 20 27113331 27181382 PCT
Gma10g00810 10 11863855 11868034 Gma19g01938 19 48536858 48538460 PCT
Gma02g01544 02 30839745 30841316 Gma19g01938 19 48536858 48538460 PCT