Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01923 ATGGAAAATGCAAGCACGTCTAGCTTAGCGAGAACGAAATCGGATCAGCTACTGGAGACGGTGGCCACAACAGCTGAGAAGTCGCCACCTTCGGCGGAGGGCGGCGGGGTCCTGTCAAGGAAATCGAGCTGGAGGATGACGGCGTCGTCGCCGGGTGGCGGCGGTGGGAGAAACACATACATAAGGAAGGCAAGGAGCGCTCAGTTGAAGGTAGAGGTGGACGAGGTTGGCAGCGGCGTGGCTCTTAGCCGAGCTTCCAGCGCCAGCTTGGGCCTCTCATTCTCCTTCACCGGCTTCACTCTCCCTCCCGATGAAATCGCCGATTCCAAACCATTCAGCGACGATGATATCCCGGAGGATATTGAAGCTGGAACTCCTAAGCCAAAGTTTCAGACGGAACCTACTCTGCCAATATATCTAAAGTTCACAGATGTGACATACAAAGTAGTGATGAAAGGCATAACTACAACTAAGGAGAAGGATATCTTAAAGGGGATCACTGGTTCTGTAAATCCTGGGGAAGTTTTGGCATTGATGGGTCCGTCAGGAAGTGGAAAGACATCTTTGTTAAATCTGCTTGGAGGAAGGTTGATTCAATCCACAATTGGTGGCTCTATCACTTACAATGATCAACCTTATTCCAAGTTCCTAAAGAGCAGGATTGGATTCGTGACACAAGACGATGTTCTGTTTCCTCACCTTACTGTAAAAGAAACATTGACTTATGCAGCCCGCCTAAGATTGCCAAATACATTAACGAAAGAGCAAAAGGAAAAACGAGCTTTGGAAGTCATTGATGAGCTGGGGTTGGAGAGGTGCCAAGACACTATGATAGGAGGTTCCTATGTTCGAGGAATATCTGGTGGAGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCACTTCTGTTTCTTGATGAACCAACTTCTGGTTTGGATTCTACAACAGCGTTAAGGATAGTTCAGATGCTACAAGACATAGCAGAGGCTGGTAAAACCGTGGTGACAACAATCCATCAACCATCAAGCAGACTCTTTCATAAATTTGATAAGTTGATCCTTCTAGGAAAAGGGAGTTTGCTGTACTTTGGAAAAGCATCTGATGCAATGGACTATTTCCAGTTTATAGGCTGTGCACCTCTTATTGCCATGAACCCAGCAGAGTTTTTATTAGACCTTGCAAATGGAAACGTAAATGATATTTCTGTGCCATCAGAGTTAAAGGATATAGTGCAGGTGGGAAATGCTGAAGCTGAAACATGCAATGGGAAACCTTCAGCCTCAGTTGTACAAGAGTATCTGGTGGAGGCATATGATTCTCGAGTCGCAGAAATAGAGAAGACAAAGTTAATGGTTCCTGTCCCTCTTGATGTAGAACTGAAGTCTAAGGTTTGTTCTTGTAAAAGACAGTGGGGAGCAAGTTGGTTTGAGCAATTTTCCATATTATTTTCAAGAGGATTCAAAGAACGGAGGCATGACTACTTTAGCTGGTTAAGAATCACCCAAGTTCTAGCCACTGCAGTCATCTTAGGATTACTCTGGTGGCAATCAGATGCTAAAACACCTAAAGGTTTGCAAGACCAGGCCGGACTGCTTTTCTTTATTGCTGTGTTTTGGGGATTCTTTCCTGTGTTCACTGCAATATTCACATTTCCTCAAGAGAGAGCCATGCTGACTAAGGAACGAACAACCGATATGTACAGACTAAGTGCTTATTTCGTGGCTAGAACTACAAGTGACCTTCTACTGGACCTGGTGCTACCAGTGTTTTTCCTCCTTCTTGTTTATTTCATGGCCAATTTGAGACTCGGTTCAGGGCGTTTTTTCTTTAGTATTCTTACCGTTTTTCTCTGCATCATAGCAGCTCAGGGTCTTGGACTTGCTATAGGGGCTACACTTATGGACTTAAAAAGGGCAACAACTTTGGCTTCAGTAACTGTGATGACTTTCATGCTGGCTGGAGGGTTTTTTGTGAAGAAAGTCCCCATATTTATATCATGGATTCGCTACATATCTTTCAACTACCATACGTATAAACTTTTGCTCAAGGTTCAATATGAACACATTACACCTACCATAGATGGGATCAGAATTGACAGTGGATTCAGAGAGGTTGCTGCTCTGACGGCCATGGTTTTTGGTTACCGTTTATTGGCATATCTTTCATTGCGGCGGATGAAACTTCAAGCTGGAAATTAA 2211 0.4423 MENASTSSLARTKSDQLLETVATTAEKSPPSAEGGGVLSRKSSWRMTASSPGGGGGRNTYIRKARSAQLKVEVDEVGSGVALSRASSASLGLSFSFTGFTLPPDEIADSKPFSDDDIPEDIEAGTPKPKFQTEPTLPIYLKFTDVTYKVVMKGITTTKEKDILKGITGSVNPGEVLALMGPSGSGKTSLLNLLGGRLIQSTIGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPNTLTKEQKEKRALEVIDELGLERCQDTMIGGSYVRGISGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASDAMDYFQFIGCAPLIAMNPAEFLLDLANGNVNDISVPSELKDIVQVGNAEAETCNGKPSASVVQEYLVEAYDSRVAEIEKTKLMVPVPLDVELKSKVCSCKRQWGASWFEQFSILFSRGFKERRHDYFSWLRITQVLATAVILGLLWWQSDAKTPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLTKERTTDMYRLSAYFVARTTSDLLLDLVLPVFFLLLVYFMANLRLGSGRFFFSILTVFLCIIAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKKVPIFISWIRYISFNYHTYKLLLKVQYEHITPTIDGIRIDSGFREVAALTAMVFGYRLLAYLSLRRMKLQAGN 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01923 736 Gene3D - 139 380 IPR027417 -
Gma19g01923 736 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 140 386 IPR003439 GO:0005524
Gma19g01923 736 CDD ABCG_EPDR 137 368 - -
Gma19g01923 736 Pfam ABC transporter 163 314 IPR003439 GO:0005524
Gma19g01923 736 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 28 730 - -
Gma19g01923 736 ProSitePatterns ABC transporters family signature. 286 300 IPR017871 GO:0005524
Gma19g01923 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 380 IPR027417 -
Gma19g01923 736 MobiDBLite consensus disorder prediction 1 27 - -
Gma19g01923 736 Pfam ABC-2 type transporter 481 690 IPR013525 GO:0016020|GO:0140359
Gma19g01923 736 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 28 730 - -
Gma19g01923 736 MobiDBLite consensus disorder prediction 1 60 - -
Gma19g01923 736 SMART AAA_5 172 363 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01923 Gma-Chr19 48424994 48434155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01923 162 400 Calmodulin-binding Proteins AT2G36910 27.755 2.36e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01923 K05681 - gmx:100796008 1392.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01923 19 48424994 48434155 Gma19g01923 19 48424994 48434155 ECH
Gma19g01923 19 48424994 48434155 Gma03g01883 03 44781089 44789880 GST
Gma19g01923 19 48424994 48434155 Gma10g00796 10 11370733 11382047 PCT
Gma10g00796 10 11370733 11382047 Gma19g01923 19 48424994 48434155 PCT