Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01894 ATGATTTCTGCTGATGCCACCACCGTCGCGTGTGCACCGCCACAGCTTCCGCAGTTCTCCACCGACAACAACAACCACCTATACGATTCGGAGCTGAAGTCAACAATAGCCGCGTGCTTCCCTCGCGCCTTGGCCGCCGAACAAAGCACCGAACCGCAAAAACCATCCCCCAAGAAAACCGTCGACACCTTCGGGCAACGCACCTCCATCTACCGCGGCGTGACCCGACATAGATGGACTGGGAGATAG 249 0.5783 MISADATTVACAPPQLPQFSTDNNNHLYDSELKSTIAACFPRALAAEQSTEPQKPSPKKTVDTFGQRTSIYRGVTRHRWTGR 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01894 82 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 47 82 - -
Gma19g01894 82 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 47 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01894 Gma-Chr19 48121690 48124119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01894 27 82 AP2-EREBP Transcription Factor Family AT5G57390 52.113 1.27e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01894 K09285 - gmx:100803558 164.851