Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01890 ATGGCCGATAAGCAACCCCACTTGAACGGTGCTTATTACGGTCCCGCCATTCCCCCGGCGGAGCAACCACGCTACCGCCCTCACCGCGGCAGAAGCTGCTGTTGCTGTCTCTTCGGAATCTTGTGGAAGATTCTGGTTGCACTTATTGTCCTCGTTGGCCTTGCAATCCTCATTTTCTGGTTGGTGGTTCAACCCCGCTACTTCAAGTTCCATGTCACGAAAGCCGACCTAACCCAATTTGATTACTATAGCAACAACAACACCCTCCACTACAACATGGTCCTCAACTTCACTGCACGCAACCCCAACAAGAAGCTCAGCATATACTACGACAAGGTTGAGGCATTAGCATTCTACGAGGATGTCAGGTTCGCCAATTACGATGTGATCACTCACATGAACTCCTTCCGGCAGTACAAGAAGAGCAGCAGCCCCATGAGCGCTGTTTTCACGGGGCAGCAAGTGCTGATGCTCAACAATGAACAAGTCTCAGAGTTGAACCAAGACAAGAATGCTGGGGTTTATGACATCTATGTGAAGCTCTACTTCAGGATTAGGTTCAGGCTTGGGGACGTCATATCCAATGACTACAAGCCCAAGGTCAAATGTCACCTCAAGGTCCCTTTTAGTAAAAATGGCACCTTTACTCTGTTTCCGACCACCAAGTTGGAGTTTCAAGAGGAGCAAGGCCTCTTCTTCTCGGACTCGGAGACTTCAGCTCTCACTACAGAAAATGTGGAGAGTGCATTTCTCAAACTTCTAGAAGATATCGGCATGGTAGTATCTAAAACGGCATTGGAATGCGGTACTGGTTATGGGAAGGAGAATGGTGTGACATCTGACAACAATGCTACAACACTGAGTGAAATAATGGTAGACATAATCTCAGCTGGTCCTGAATTGGAAAATAGAGATGAAGAAATGACCCAAATAGTCATAAGATCAAGCGTCGCAGGTTTGGATAAACCATTAACTAAACAGGCTAGAGGGCTAAAATTAAAAATCCGTTTCTTGAAATTTCTTCCTAACACAAAAGCACCACCACCTGAAGCAAGGCCCGGAAGGAGGATCACCACTCCTTCTTACCTCAAGGATTTTGTTAACTGA 1107 0.4652 MADKQPHLNGAYYGPAIPPAEQPRYRPHRGRSCCCCLFGILWKILVALIVLVGLAILIFWLVVQPRYFKFHVTKADLTQFDYYSNNNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDVRFANYDVITHMNSFRQYKKSSSPMSAVFTGQQVLMLNNEQVSELNQDKNAGVYDIYVKLYFRIRFRLGDVISNDYKPKVKCHLKVPFSKNGTFTLFPTTKLEFQEEQGLFFSDSETSALTTENVESAFLKLLEDIGMVVSKTALECGTGYGKENGVTSDNNATTLSEIMVDIISAGPELENRDEEMTQIVIRSSVAGLDKPLTKQARGLKLKIRFLKFLPNTKAPPPEARPGRRITTPSYLKDFVN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01890 368 Pfam Late embryogenesis abundant protein 97 202 IPR004864 -
Gma19g01890 368 PANTHER OS05G0367900 PROTEIN 18 224 IPR044839 GO:0098542
Gma19g01890 368 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 18 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01890 Gma-Chr19 48090394 48093597 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01890 62 210 SNARE and Associated Proteins AT1G32270 34.228 3.43e-20 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01890 - - gmx:100807701 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01890 19 48090394 48093597 Gma19g01890 19 48090394 48093597 ECH
Gma19g01890 19 48090394 48093597 Gma03g01853 03 44483248 44484210 GST
Gma19g01890 19 48090394 48093597 Gma10g00737 10 9287246 9287929 PCT
Gma10g00737 10 9287246 9287929 Gma19g01890 19 48090394 48093597 PCT