Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01889 ATGGCCGATAAGCAACCCCACCTGAACGGTGCTTATTACGGTCCCGCCATTCCCCCGGCGGAGCAACCACGCTACCGCCCTCACCGCGAAAGAAGCTGCTGCTGCTGCCTCTTCGGAATCTTGTGGAAGATTCTGGTTGCACTCATTGTCCTCGTTGGCCTCGCAGTACTCATATTCTGGCTGGTGGTTCAACCCCGCTACTTCAAGTTCTACGTCACGGAAGCCGACCTAACACAATTTGATTACTATAGCAACAACAACACCCTCCACTACAACATGGTCCTCAACTTCACTGCACGCAACCCCAACAAGAAGCTCAGCATATACTACGACAAGGTTGAGGCATTAGCATTCTACGAGGATGTCAGGTTCGCCAATTACAGTGTGATAACGCCCATGAACTCCTTCCGGCAGTACAAGAAGAGCAGCAGCCCCATGAGCGCTGTTTTATCGGGGCAGCAAGTGTTGCCGCTCGACAACGACCTAGTCTCAGAGTTGAACCAAGACAAGATTGGTGGGGTGTATGAGATCTATGTGAAGCTCTACTTCAGGATTAGGTTCAGGCTCGGGGATGTCAAAACCCGTAGCTTCAAGCCCAAGGTCAAATGTGATGCGAAGGTTCCCTTGAGGACCATTGGCAACGTAACTCTGTTTCAGACCACCAAGTGTGATGTCGATTACTAG 684 0.5117 MADKQPHLNGAYYGPAIPPAEQPRYRPHRERSCCCCLFGILWKILVALIVLVGLAVLIFWLVVQPRYFKFYVTEADLTQFDYYSNNNTLHYNMVLNFTARNPNKKLSIYYDKVEALAFYEDVRFANYSVITPMNSFRQYKKSSSPMSAVLSGQQVLPLDNDLVSELNQDKIGGVYEIYVKLYFRIRFRLGDVKTRSFKPKVKCDAKVPLRTIGNVTLFQTTKCDVDY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01889 227 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 18 225 - -
Gma19g01889 227 PANTHER OS05G0367900 PROTEIN 18 225 IPR044839 GO:0098542
Gma19g01889 227 Pfam Late embryogenesis abundant protein 97 203 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01889 Gma-Chr19 48088886 48089646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01889 62 209 SNARE and Associated Proteins AT1G32270 34.459 2.50e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01889 - - gmx:100807174 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01889 19 48088886 48089646 Gma03g01852 03 44478076 44481107 GST
Gma19g01889 19 48088886 48089646 Gma10g00736 10 9259961 9260943 PCT
Gma10g00736 10 9259961 9260943 Gma19g01889 19 48088886 48089646 PCT