Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01888 ATGTTTGGTGGCCGGTTAAGTTTGTTGTTTGTAGATTATATGACGCGCTTTTTCCAACTCCCCTACCCCACAGTTGGTTATATAACCAAACCACAGACACAAGGAACTTCAAGTCTTCCATTGATTCCATCTCTCACATCATTTCCCACTCCCGCGTTTCCTTTATCATATTCTTATTCCGCCATGTCCCAGTTGAACGGAGCCTACTATGGCCCCTCCATCCCGCCGCCGAAAACCTCCTACCACCGCCCAGGGCGCGGCGGAGGCTGCTGCTGCGGCTGCCTCTTCAGCCTCATCTTCAAGCTCATCTTAACCGTGATAATCATCGTTGGCATCGCCGGGTTCGTGTTCTGGCTCATAGTCCGTCCGAACGTGGTGAAATTCCACGTGACCGACGCCACCCTGACGCAGTTCAACTACACCGCCAACAACACTCTCCACTACGACCTCGCCCTAAACATCACGGTCCGAAACCCCAACAAGAGGCTCGGAATCTACTACGACCGCATCGAGGCGCGTGCAATGTTCCACGACGCAAGGTTCGATTCACAGTTCCCGGAGCCGTTCTACCAGGGCCACAAGAGCACGAAGGTGCTGAACCCAGTCTTCAAGGGTCAGCAAGTGGTGCCACTCAACGCTGAGCAAAGCGCGGAACTGAAGAAGGAGAACGCCACTGGGGTGTACGAGATCGACGTGAAGATGTACCTTAGGGTGAGGTTCAAGCTGGGGGTGTTGAAGACCAAGACGCTCAAGCCCAAAGTATCATGCGACTTGCGTGTTCCTTTCAAAGGAAGCGCCGCCTTTGAGACCACCAAGTGCCACTGGGATCGCTGA 834 0.5396 MFGGRLSLLFVDYMTRFFQLPYPTVGYITKPQTQGTSSLPLIPSLTSFPTPAFPLSYSYSAMSQLNGAYYGPSIPPPKTSYHRPGRGGGCCCGCLFSLIFKLILTVIIIVGIAGFVFWLIVRPNVVKFHVTDATLTQFNYTANNTLHYDLALNITVRNPNKRLGIYYDRIEARAMFHDARFDSQFPEPFYQGHKSTKVLNPVFKGQQVVPLNAEQSAELKKENATGVYEIDVKMYLRVRFKLGVLKTKTLKPKVSCDLRVPFKGSAAFETTKCHWDR 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01888 277 Pfam Late embryogenesis abundant protein 153 256 IPR004864 -
Gma19g01888 277 PANTHER OS05G0367900 PROTEIN 81 275 IPR044839 GO:0098542
Gma19g01888 277 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 81 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01888 Gma-Chr19 48085968 48086801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01888 120 262 SNARE and Associated Proteins AT1G32270 40.972 3.30e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01888 - - gmx:100806641 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01888 19 48085968 48086801 Gma03g01851 03 44475044 44475955 GST
Gma19g01888 19 48085968 48086801 Gma10g00732 10 9128563 9129381 PCT
Gma19g01888 19 48085968 48086801 Gma02g01873 02 43424950 43426011 PCT
Gma10g00732 10 9128563 9129381 Gma19g01888 19 48085968 48086801 PCT
Gma02g01873 02 43424950 43426011 Gma19g01888 19 48085968 48086801 PCT