Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01879 ATGTCTGGCTCCAGAAAGAAGCTTCTTCTGAACACCGTGTCCGTGAAACTAGGCTGCGGCACCTGCAGAAGACCAAACCTGTGTCGCATATTCCACCCGAAGCCAAAACCCAAGAATCTTAACAACACTTACCGAAAGCACAAACATTCTTCTTCTTCTTCTTCCTTTTTTTCAGGCCAATGGGGTGGTGAGGACAAGTGTGACAGCACCAGCACCACCCCCACCCCCACCCCCACCAACACCACATTCTCACCCTACGTTGATTCCTCGCACTTTTCTGACTCAGATTCGTACGTGAAGGCCGTGGGGGGTTTAGGCAGAGCTGGGAAAGAAGGTGTGGCTGTGGAGAAAGACTCTGATGACCCTTATCTTGATTTCAGACATTCCATGCTGCAAATGATATTGGAGAATGAGATATACTCCAAGCAAGATCTCAGAGAGCTTCTCAACTGCTTTCTTCAGCTGAATTCACCGCACCACCATGGTGTCATAGTCAGAGCTTTCACTGAGATCTGGAATGCTGTTTTCTCTGTGAGGTCCAGTTCACACATCAACCGTAAGCCACGTAATGATGAACTCTTTACCATGCCATATTTCATAATTCATGGCAATGGAAACACAACGGGCCATCATTGA 636 0.4764 MSGSRKKLLLNTVSVKLGCGTCRRPNLCRIFHPKPKPKNLNNTYRKHKHSSSSSSFFSGQWGGEDKCDSTSTTPTPTPTNTTFSPYVDSSHFSDSDSYVKAVGGLGRAGKEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKQDLRELLNCFLQLNSPHHHGVIVRAFTEIWNAVFSVRSSSHINRKPRNDELFTMPYFIIHGNGNTTGHH 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01879 211 MobiDBLite consensus disorder prediction 33 84 - -
Gma19g01879 211 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 113 175 IPR006458 -
Gma19g01879 211 MobiDBLite consensus disorder prediction 46 84 - -
Gma19g01879 211 ProSiteProfiles OVATE domain profile. 115 174 IPR006458 -
Gma19g01879 211 PANTHER TRANSCRIPTION REPRESSOR OFP6 1 180 - -
Gma19g01879 211 Pfam Transcriptional repressor, ovate 119 175 IPR006458 -
Gma19g01879 211 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 180 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01879 Gma-Chr19 48030244 48032956 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma19g01879 Ovate 3.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01879 - - gmx:106797222 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01879 19 48030244 48032956 Gma19g01879 19 48030244 48032956 ECH