Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01863 ATGAGAGGGAAAAGGAAAACTTGTAATGTAGAGGATTTTCAATTTTATATGTCCAAGCCCATGTGTAAGGCCCGGCCCGGCCAGGCCCAATTGAACGGTTTATTGTTTTGTTCATATATACGATACGAGAGACAGGGAAGGAGTGTCTGGTGTGTGAGCAAAATCAAAATGTGGGCAAGCGCCGCAGAAGGTGGTGCTCCGGAGGTGACTCTGGAAACTTCCATGGGTTCTTTCACCTTTGAGCTGTACTACAAGCATGCGCCGAGGACTTGTAGGAACTTCATTGAACTGTCTCGCCGAGGTTACTACGACAACGTTAAATTCCATAGGATCATCAAGGACTTCATAGTACAAGGTGGGGATCCCACTGGAACAGGAAGAGGAGGAGAATCCATATATGGTGCAAAGTTTGAAGATGAGATTAAACGAGAGTTGAAGCACACTGGAGCTGGAATCTTATCCATGGCAAATGCTGGCCCAAACACCAATGGTAGTCAGTTCTTTATTACTCTGGCTCCATGCCCCTCTCTCGATGGAAAACACACGATATTTGGAAGAGTGTGTAGGGGGATGGAAATTATGAAAAGACTTGGCAGCATCCAAACAGATAACAACGATAGGCCCATCCATAACGTGAAGATACTACGTACTTCAGTCAAGGATTGA 666 0.455 MRGKRKTCNVEDFQFYMSKPMCKARPGQAQLNGLLFCSYIRYERQGRSVWCVSKIKMWASAAEGGAPEVTLETSMGSFTFELYYKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIVQGGDPTGTGRGGESIYGAKFEDEIKRELKHTGAGILSMANAGPNTNGSQFFITLAPCPSLDGKHTIFGRVCRGMEIMKRLGSIQTDNNDRPIHNVKILRTSVKD 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01863 221 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 72 219 IPR002130 GO:0000413|GO:0003755
Gma19g01863 221 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 82 97 IPR002130 GO:0000413|GO:0003755
Gma19g01863 221 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 108 120 IPR002130 GO:0000413|GO:0003755
Gma19g01863 221 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 151 166 IPR002130 GO:0000413|GO:0003755
Gma19g01863 221 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 166 178 IPR002130 GO:0000413|GO:0003755
Gma19g01863 221 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 179 194 IPR002130 GO:0000413|GO:0003755
Gma19g01863 221 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 1 62 220 - -
Gma19g01863 221 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 62 220 IPR044666 -
Gma19g01863 221 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 69 218 IPR002130 GO:0000413|GO:0003755
Gma19g01863 221 Gene3D - 52 221 IPR029000 -
Gma19g01863 221 SUPERFAMILY Cyclophilin-like 69 219 IPR029000 -
Gma19g01863 221 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 103 120 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01863 Gma-Chr19 47842535 47845229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01863 69 219 U-box Gene Family AT5G67530 49.007 7.78e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01863 K12733 - gmx:100500406 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01863 19 47842535 47845229 Gma19g01863 19 47842535 47845229 ECH
Gma19g01863 19 47842535 47845229 Gma03g01822 03 44250370 44253063 GST