Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01853 ATGTTGGGGAAAAAGATGGTATTATTCAAGAAACTGGCAAAAAAGGTGAAGGGTGTACGTGGAATTGACCCTGACCCTTACCCTGCACATCACGAGTGTTTGCTCAAGGAATATGAAGAAGAATGTGCCATTAACACACCCCCAACTGGGTTTTTTGCACTTTATGTTGGGGAAGAGCGTCAAAGATACGTGGTTCCGACACGCTACCTTTCTCACCCGTTATTCAAGATGCTGTTGGAGAAGGCTTACAATGAGTTTGGATTTTCGCAAAGGAATGGCCTTGTAGTTCCATGCAGTGTTTCCACATTTCAGGAGGTGGTGAATGCTATAGAATGCAACAACGACAAGTTTGACTTAGGAAAGATTTTTGCAGAATTTGTTTGA 384 0.4271 MLGKKMVLFKKLAKKVKGVRGIDPDPYPAHHECLLKEYEEECAINTPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKAYNEFGFSQRNGLVVPCSVSTFQEVVNAIECNNDKFDLGKIFAEFV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01853 127 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 127 - -
Gma19g01853 127 Pfam Auxin responsive protein 40 109 IPR003676 GO:0009733
Gma19g01853 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 127 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01853 Gma-Chr19 47756443 47756922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01853 39 113 Calmodulin-binding Proteins AT5G20810 49.367 2.66e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01853 K14488 - gmx:100776885 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01853 19 47756443 47756922 Gma19g01853 19 47756443 47756922 ECH