Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01833 ATGGAGAGTGGAGTGAACAGAAGAAAAAATTCTGCAGCATCAGCCCGTGCTCATACCAGGAACCAAAACAAAAGCACTTCAATTCATCTCCCTTCGGGAATTTTTGGAACAGTGCTGGCAGTGTTGTTCATTGGGTTTGTAGCATGGGGTTATCAAGCTATTCAACCTCCTGCTTCAAAGATATGTGGATCTCCTAATGGGTCCACTATAACAGCACCCAGAATCAAACTAAGAGATGGAAGGAATTTAGCATACAAAGAGCATGGTGTCCCAAAAGATGTAGCCAAGCATAAAATCATCTTTGTCCATGGTTTTGATGCTTGCAGGCATGATGCCTATGTTTCCAAAACACTATCACCTGATGTTGCTGAGAAATTAGGGGTCTACATTGTATCTTTTGATAGACCCGGGTATGGGGAAAGTGATCCTGATCCAATTCAAACACTGAAGAGCCTGGCATTAGATATAGAAGAACTTGCTGATAAATTGGGATTAGGGCCAAATTCTACACTGGCAAGTGCAGTGCTCATAGCCCCAGTTCTCAACTACTGGTGGGCTGGTCTTCCTGCAAACTTAACTACTGAAGTTTTCTACCAACAAAAACTTCAAGACCAGTGGACAGTTTGTGTTGCTCACTACATACCATGGCTAACTTACTGTTGGAACACTCAAAGATGGTTCCCAGCTTCTAGTTTAATTGCTGACAGTATAGATCTTCTATCCCTTCAGGACAAAGAACTTTTGCCTAAGAGGTCTGATCGAAAGAATCATGTGGCTCAGgtgctgaccacttgTTCCCTCATGTTGATGACACATCCATCTCATCCTCACCTCAGTATCATAAGAATAATAAGCTCTTGTCACTGTTACAAAAGGAACTTCATTTACCAGCTTCGCTTTCGAATTTCAATTTCCAGGAAGAAGAAAAAGATGGTGATTGAGGAGGGCGAGATGAAGTCCCAAGGTGAGGTGGAATCATGGCTCCAGCAAGAAGCGAAGAAGAACCACCATTCTCCATTATTCTCATCTTCTTCATATCTGGGAAGACAAACATCATCGATATACTCTCTCACACTGGACGAGTTCCAGCACAGTCTATGCGAGAGCGGCAAGAACTTCGGCTCCATGAACATGGACGAGTTCCTCAGCAGCATCTGGAACGCTGAAGAGAACAGCCAAGCCATCACCAACAACAACGTCCCTCTGTCGTCGACCCTAACAATATTAAGGAAACAGCCAAGCCTCCCTCGCCAACCCTCACTGTCCCTCCCTGCTCCTCTTTGTAGGAAAACCGTTGACGAGGTTTGGTCCCAGATTCAAAAAGAACAAAACAAGAACAACAACATTAGCAATGTTCTTAATGATAATACCGAGTCTGCCCCTCGCCAACCCACTTTTGGTGAGATGACTTTGGAGGATTTTTTGGTTAAGGCCGGTGTAGTTCGGGAAACAACGTGTGCACCGCCACTACCGGTGTCTCACTCTCATCAGCCGCATTACGCGAATAATAACAACAACGTTGCAATGGCTCCTTCTTTTGTTGGTAGGCATGTTGGTGCAGTGAGTAACGTGGTTGCACCGGGTTATCAACAAGTTGTTGGGGAGGCTTCTGGTGGGTATGGTAAGAGGGATCATAATGGTGGTGGGTATCATTGTTTTGGAGGTGGTGGTGGTGGGTATGGGGTGGGGCCCACAATGGGAATGGGTGGGCCTGTGAGTCCGGCTAATTCGTCTGATGGGATAGGGAATGATGGAGGGCAGTTTGGGCTTGACATGGGGGGTTTGAGAGGGAGAAAGAGGGTGGTGGATGGTCCTGTGGAAAAGGTGGTGGAGAGAAGGCAGAGGAGGATGATCAAGAATAGAGAGTCAGCTGCCAGATCTAGAGCCAGAAAACAGGCATACACAGTGGAATTAGAAGCAGAACTAAACCAGTTAAGAGAAGAGAACTCCCAACTGAAACAGGCGCTGGCCGAGCTCGAGAGGGGAAGAAAACAACAG 1998 0.4585 MESGVNRRKNSAASARAHTRNQNKSTSIHLPSGIFGTVLAVLFIGFVAWGYQAIQPPASKICGSPNGSTITAPRIKLRDGRNLAYKEHGVPKDVAKHKIIFVHGFDACRHDAYVSKTLSPDVAEKLGVYIVSFDRPGYGESDPDPIQTLKSLALDIEELADKLGLGPNSTLASAVLIAPVLNYWWAGLPANLTTEVFYQQKLQDQWTVCVAHYIPWLTYCWNTQRWFPASSLIADSIDLLSLQDKELLPKRSDRKNHVAQVLTTCSLMLMTHPSHPHLSIIRIISSCHCYKRNFIYQLRFRISISRKKKKMVIEEGEMKSQGEVESWLQQEAKKNHHSPLFSSSSYLGRQTSSIYSLTLDEFQHSLCESGKNFGSMNMDEFLSSIWNAEENSQAITNNNVPLSSTLTILRKQPSLPRQPSLSLPAPLCRKTVDEVWSQIQKEQNKNNNISNVLNDNTESAPRQPTFGEMTLEDFLVKAGVVRETTCAPPLPVSHSHQPHYANNNNNVAMAPSFVGRHVGAVSNVVAPGYQQVVGEASGGYGKRDHNGGGYHCFGGGGGGYGVGPTMGMGGPVSPANSSDGIGNDGGQFGLDMGGLRGRKRVVDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENSQLKQALAELERGRKQQ 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01833 666 SMART brlzneu 608 666 IPR004827 GO:0003700|GO:0006355
Gma19g01833 666 SUPERFAMILY Leucine zipper domain 612 661 IPR046347 GO:0003700|GO:0006355
Gma19g01833 666 Gene3D alpha/beta hydrolase 64 227 IPR029058 -
Gma19g01833 666 SUPERFAMILY alpha/beta-Hydrolases 70 221 IPR029058 -
Gma19g01833 666 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 615 630 IPR004827 GO:0003700|GO:0006355
Gma19g01833 666 Gene3D - 610 664 - -
Gma19g01833 666 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 610 661 IPR004827 GO:0003700|GO:0006355
Gma19g01833 666 Coils Coil 628 665 - -
Gma19g01833 666 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 314 666 IPR043452 GO:0003700|GO:0045893
Gma19g01833 666 MobiDBLite consensus disorder prediction 1 26 - -
Gma19g01833 666 CDD bZIP_plant_BZIP46 612 659 - -
Gma19g01833 666 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 314 666 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Gma19g01833 666 Pfam bZIP transcription factor 612 661 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01833 Gma-Chr19 47609650 47619813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01833 311 666 bZIP Transcription Factor Family AT2G36270 49.652 1.38e-97 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma19g01833 bZIP_1 6.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01833 - K14432 gmx:100818567 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01833 19 47609650 47619813 Gma19g01833 19 47609650 47619813 ECH
Gma19g01833 19 47609650 47619813 Gma10g00661 10 7350152 7356230 PCT