Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01827 atggccgaagaacaccgatgccaagctcccgaAGGTCACAGACTCTGCTCCAACAACTGCGGTTTCTTTGGTAGCCCCGCCACCATGAATCTCTGTTCCAAATGCTACAGAGACATCCGTTTGAAGGAAGAAGAACAAGCCAAAACCAAATCCACAATCGAAACCGCTCTTTCCGGATCTTCCTCCGCCACCGTCACCGCAACCGCCGTCGTTGCCTCCTCCGTGGGATCCCCTCCGGCGCCGGTTGAATCCCTCCCTCAACCACCGGTGCTGATTTCGCCGGATGTAGCCGCACCGGTTCAGGCGAACCGGTGCGGCGCGTGTAGGAAGCGCGTGGGGTTGACAGGGTTCAAGTGCAGGTGCGGAACAACGTTTTGTGGGAGCCACAGGTACCCCGAGAAACACGCGTGTGGCTTCGATTTCAAGGCGGTGGGGAGAGAGGAGATAGCACGGGCGAATCCCGTGATCAAAGGCGAGAAGCTACGGAGGATTTAA 495 0.5394 MAEEHRCQAPEGHRLCSNNCGFFGSPATMNLCSKCYRDIRLKEEEQAKTKSTIETALSGSSSATVTATAVVASSVGSPPAPVESLPQPPVLISPDVAAPVQANRCGACRKRVGLTGFKCRCGTTFCGSHRYPEKHACGFDFKAVGREEIARANPVIKGEKLRRI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01827 164 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 164 - -
Gma19g01827 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 58 - -
Gma19g01827 164 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Gma19g01827 164 Gene3D - 1 64 - -
Gma19g01827 164 Pfam AN1-like Zinc finger 105 141 IPR000058 GO:0008270
Gma19g01827 164 SUPERFAMILY AN1-like Zinc finger 99 159 IPR035896 -
Gma19g01827 164 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 164 - -
Gma19g01827 164 Gene3D - 82 160 IPR035896 -
Gma19g01827 164 ProSiteProfiles Zinc finger AN1-type profile. 99 145 IPR000058 GO:0008270
Gma19g01827 164 SMART AN1_Zf_4 105 142 IPR000058 GO:0008270
Gma19g01827 164 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Gma19g01827 164 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01827 Gma-Chr19 47553561 47555383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01827 1 164 C2H2 Transcription Factor Family AT3G52800 51.765 1.42e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01827 - - gmx:100789686 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01827 19 47553561 47555383 Gma19g01827 19 47553561 47555383 ECH
Gma19g01827 19 47553561 47555383 Gma03g01784 03 43960084 43962295 GST
Gma19g01827 19 47553561 47555383 Gma10g00651 10 7228373 7236578 PCT