Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01821 ATGAAGGTCATCGCCGCCTACTTGCTCGCCGTATTGGGAGGCAATGCAGCCCCTTCCGCTGATGACTTAAGGACCATCCTTGGCTCCGTTGGAGCTGACGCGAATGATGACAACATCAGCAACTTCTTGTCTGAAGTTAAGGGCAAAGACATTGCGGAGCTTATCGCCGCCGGTAGGGAAAAGTTGGCCTCCGTGCCTTCTGGCGGTGGCGCCGCGGTTTCCGTGGCCGCTGCTCCCGGTGGTGGCGCTGCTGCACCGGCTGCCGCCGAATCTAAGAAGGAGGAAAAGGTGGAAGAGAAGGAGGAATCGGATGACGATATGGGATTCAGTCTCTTTGATTAA 342 0.5643 MKVIAAYLLAVLGGNAAPSADDLRTILGSVGADANDDNISNFLSEVKGKDIAELIAAGREKLASVPSGGGAAVSVAAAPGGGAAAPAAAESKKEEKVEEKEESDDDMGFSLFD 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01821 113 Hamap 50S ribosomal protein L12 [rpl12]. 2 113 IPR027534 GO:0003735|GO:0005840|GO:0006414
Gma19g01821 113 Pfam 60s Acidic ribosomal protein 18 112 - -
Gma19g01821 113 Gene3D - 1 59 IPR038716 -
Gma19g01821 113 MobiDBLite consensus disorder prediction 81 113 - -
Gma19g01821 113 CDD Ribosomal_P2 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Gma19g01821 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Gma19g01821 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01821 Gma-Chr19 47508228 47510994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01821 1 113 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 67.257 5.26e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01821 K02943 - gmx:100787024 145.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01821 19 47508228 47510994 Gma03g01775 03 43890460 43891120 GST