Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01820 ATGGGTTCATTCTCTGGCACTTGTGAAATAGTTGAAGCAAGGGAGGAAGAGCTAAATACAAGGAAAGCTCCTGGGGTTTATCAGTCCAGTTCTGAGTGTAGCACGTCTGAGAAAAATCAGAAATTTTCGGTGCTGAAATTGGGATACAAGGATGATCTAGATGATGATATCAACAAGCTTTTTGAATCAATTGCTCTTAAATCTTCATCAAGGGATTTGAGCCTTTTCCAAGATGGTACAAGTCCTAGGCTGAAAAGTGCATTAAAAAAACCAATTACAATGGGTATTCCACGGTCCCCAAGAGTTGGGACTTCTGAGCCCGCTAATTTGAAGCAAGCATTAAGAGACCTTTGTATATCTAAAGCATCCGAAATGGCTGCTATGAAACGATTATCAAAGTCAACAACAGCTTCTCCAAGATTATCTGAAGTTGGGAAGATACAGACATTGTACAATTCAGTTGTAGCTGAAACCAGTCGATCTGGGTCTTCCTTTGTTGAGAGCAATGGGCGTCAAATTGAAATATCTCTAGTGCCAGAAAAAGGCAAATCCCTTTCCTTGGAGAAAACCTCTCAATCTTCCCAAATTGCATTGTTGAGCCGAAACATTCATTCTTCTCGGGAAATTGCTGTTGCAACTACTAAATATGAAGCTGGGACTTCATTGATACAAAGTGATTTGGCAGGCTCGTCAAGTAAAGTTGGGATTCAATCACAACGAGTGGTACCTGTTGAAACAGAAGAACAAGCATCTGCCTCTTCTCCCTCTCTTTATAATACATCTGGATGCAAATCAGAGGTGCCCAAAAATGCTTCTTCCCCTAAAAAGTTGGGAAATAAAACATCTGTATCAAATACTGGGAAGAAAGGTAGGTTGCAAACAGTATCTTCATCTAATTCTGTAAATGGCAACAGAGTTAACAAACCGCCACGCCATGCCCCCTGGACTGTTAAATCGGTCATCAAGAACAAGAATCTGAGTAAGAAGAAACAAAAGGAGGATTCATGCTCTACTTTATGTGGTCCTACGCCCAATGAAGTTAATAAGCCAGTTCCTGGTACACCTCGGCTAATTTGTGAGAGATGTAGGTGTGCTTTGGAAAATACTAGTGAAGAAAAAAACCAAGATATTGTGGCATTAGACTCTACCAGTCCTGAAAACGGAGTAAACTTGAGTAATGTGCACTCTGGTTCAAATAAACCTGGTTTGGTGTCAAGTAGTGTTAATAAAAGCAAAACAGTTGCAAAAGTGAAGAACACCAAGTTGAAAGAGCAAATTGAATTTTCACAAAGTTCAAAGAGTAGTCAAGGTGAGTACAGCAGTAGTACAAGTACTAGTGATGAGAGCAATGTGAGTGGTTCAAGTCGTAGCACTAGGCCTCACATGTCAAAGGATGTCAGGTGGGCAGCCATACGACATGCTCAAGTGCAGCATGGAGTCTTGGGCTTGAGACACTTCAATCTTTTAAAGAAACTTGGTTGTGGAGACATTGGCACTGTATATCTTGCGGAACTAATTGGCACTAGCTGCTTGTTTGCTATTAAGGTCATGGACAATGAATTTTTAGAAAGAAGAAAGAAGATGCCTAGGGCTCAAACTGAAAGAGAAATATTAAGGATCCTGGATCATCCTTTTCTTCCCACAATGTATGCACAATTTACATCAGATAATCTATCGTGTCTGGTCATGGAGTATTGTCCAGGTGGAGATCTTCATGTTCTACGGCAGAAGCAGCTTGGTAGATATTTCTCGGAGCCAGCAGCAAGGTTTTATGTTGCTGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCCGAAAACATTCTTGTTCGGGAAGATGGCCACATTATGCTCACAGATTTTGATCTGTCCCTGAGGTGTGCTGTTAACCCAATGCTTCTGAAATCATCTGATGTTGACCCTGCAAAAATCTCTGGTTTAAGTGCACAAGCAAGTTGCATTGAGCCATTCTGCATTGAACCATCTTGTCAAGTTCCATGCTTCAGCCCAAGATTGCTACCCACCGCTGCAAAAGCAAGGAAACTAAAAGTTGATCTTGCAGCCCAGGTCAGATCATTGCCACAGCTTGTGGCCGAGCCCACAGATGCAAGATCAAACTCATTTGTTGGCACACATGAATACTTGGCTCCTGAGATCATCAAAGAAGAGGGACATGGAGCTGCAGTTGACTGGTGGACATTTGGAGTTTTTCTCTACGAACTTTTGTACGGTAGAACACCCTTTAAAGGTTCAAACAATGAAGAAACATTGGCCAACGTAGTGTTGCTGGGTCTTCGATTCCCCGAGCACCCAAATGTTAGTTTCCAAGCAAAGGATCTGATTAGAGGGTTGTTGGTTAAAGAGCCTGAAAACCGTTTGGGTTCAGAGAAAGGGGCTGCCGAGATTAAACAGCATCCCTTCTTCGAGGGCCTTAACTGGGCCTTAATTCGCTGCGCTATGCCTCCAGAACTTCCAGACTTCTATGATTTTGGAGTTTCAGACATGATGAACTCGCAGTGCAAGGGTGCTAAGTACTTAGAGTGTAAAGTAGGAGAGCATGTAGAATTCGAGTTGTTTTGA 2607 0.4216 MGSFSGTCEIVEAREEELNTRKAPGVYQSSSECSTSEKNQKFSVLKLGYKDDLDDDINKLFESIALKSSSRDLSLFQDGTSPRLKSALKKPITMGIPRSPRVGTSEPANLKQALRDLCISKASEMAAMKRLSKSTTASPRLSEVGKIQTLYNSVVAETSRSGSSFVESNGRQIEISLVPEKGKSLSLEKTSQSSQIALLSRNIHSSREIAVATTKYEAGTSLIQSDLAGSSSKVGIQSQRVVPVETEEQASASSPSLYNTSGCKSEVPKNASSPKKLGNKTSVSNTGKKGRLQTVSSSNSVNGNRVNKPPRHAPWTVKSVIKNKNLSKKKQKEDSCSTLCGPTPNEVNKPVPGTPRLICERCRCALENTSEEKNQDIVALDSTSPENGVNLSNVHSGSNKPGLVSSSVNKSKTVAKVKNTKLKEQIEFSQSSKSSQGEYSSSTSTSDESNVSGSSRSTRPHMSKDVRWAAIRHAQVQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDNEFLERRKKMPRAQTEREILRILDHPFLPTMYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRYFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVNPMLLKSSDVDPAKISGLSAQASCIEPFCIEPSCQVPCFSPRLLPTAAKARKLKVDLAAQVRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLLGLRFPEHPNVSFQAKDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAMPPELPDFYDFGVSDMMNSQCKGAKYLECKVGEHVEFELF 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01820 868 PANTHER FLIPPASE KINASE 1-RELATED 1 868 - -
Gma19g01820 868 Gene3D Phosphorylase Kinase; domain 1 484 565 - -
Gma19g01820 868 SMART serkin_6 486 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01820 868 SUPERFAMILY Protein kinase-like (PK-like) 460 843 IPR011009 -
Gma19g01820 868 ProSiteProfiles Protein kinase domain profile. 486 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01820 868 MobiDBLite consensus disorder prediction 426 463 - -
Gma19g01820 868 CDD STKc_phototropin_like 484 835 - -
Gma19g01820 868 Pfam Protein kinase domain 714 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01820 868 Pfam Protein kinase domain 487 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01820 868 Gene3D Transferase(Phosphotransferase) domain 1 566 634 - -
Gma19g01820 868 MobiDBLite consensus disorder prediction 245 306 - -
Gma19g01820 868 MobiDBLite consensus disorder prediction 426 459 - -
Gma19g01820 868 MobiDBLite consensus disorder prediction 245 312 - -
Gma19g01820 868 Gene3D Transferase(Phosphotransferase) domain 1 710 826 - -
Gma19g01820 868 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 868 - -
Gma19g01820 868 MobiDBLite consensus disorder prediction 373 407 - -
Gma19g01820 868 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01820 Gma-Chr19 47494460 47497884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01820 1 868 AGC Kinase Gene Family AT3G52890 52.079 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gma19g01820 Pkinase 2.6e-35 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01820 19 47494460 47497884 Gma03g01774 03 43875555 43878955 GST
Gma19g01820 19 47494460 47497884 Gma10g00622 10 6733738 6736891 PCT
Gma19g01820 19 47494460 47497884 Gma13g01313 13 27651101 27655586 PCT
Gma10g00622 10 6733738 6736891 Gma19g01820 19 47494460 47497884 PCT
Gma13g01313 13 27651101 27655586 Gma19g01820 19 47494460 47497884 PCT