Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma19g01816 | atggacttccatctgaaggaatggagaaaccagCATGAGTCAGAGGAACAACAACATTCTACAAAGATGCCAAAACTTCTCCCTGAATCCCATCATCAACAGCCATCTGCCACTGCACTCCCTTTGTTTGTACCTGAACCCAACAGCAGCAGCAAAGTCAGCACCCTGTCAGATTCAACATTAGCAGCTGAAACTGAAACAATGACCACTACAACCACTAACAGATTATTTCCCAGGATGGGGAGCTACTTCAGCTTGTCTCAGTGGCAGGAGCTTGAGTTGCAGGCTTTGATATTCAGGTACATGTTGGCTGGTGCTGCTGTTCCTCCTGAACTCCTTCAACCAATCAAGAAAAGCCTTCTTCATTCCCCTCACTATTTCCTCCATCACCCTCTCCAACATTACCAACCTGCTGCTTTGTTGCAATCAGGGTATTGGGGTAGAGGAGCGATGgatccggagccagggcggtgccggagaaccgacggcaagaaatggcggtgctcgagggacgtggtggctgggcaaaagtactgtgagcgccacatgcatcgtggaagaaaccgttcaagaaagcctgtggaaCTACCCACACCAACTAGTGCTAATAATTGTGATGGTGGATCTCTAGGACTAGGTGCTTCTTCATCTTCCATTTCTTCACCACCCCTAGCTTCTGCTTCACTCAAATCCCCATTTGATCTTCTTCGTCTTAATGAACGTTCCTCTGGGACCAAGAATGAAGACGAAGACCATGTGGGTGGGGATGGCAGATCAGGTGGAGGGGGTGGCCATATGCTGAGGCATTTCTTCGATGATTGGCCACGATCACTGCAAGACTCTGACAACGTTGAAAACAATGCTGCTGGCCCTAGCCTCTCTATTTCAATGCCCGGAAATGCTGCTGCTGCTTCCTCGGATGTGTCATTGAAATTGTCCACGGGCTATGGAGAGGACCCAGGCCCAAGAAATGAGAATGTGGGCCTCGTGGCAGAGCAGCTGCAGTTGAATTGGGCCGGAGGATGGGCCTCGTCTAATCAAGTGGCTTCCATGGGAGGACCACTGGCCGAGGCACTCAGATCATCTATTTCAACTTCATCTCCCACTAGTGTTTTGCATCACTTGCCTCGTGGTTCTGGATCTGAGACCAGCATTATTAGCACCTGA | 1167 | 0.4216 | MDFHLKEWRNQHESEEQQHSTKMPKLLPESHHQQPSATALPLFVPEPNSSSKVSTLSDSTLAAETETMTTTTTNRLFPRMGSYFSLSQWQELELQALIFRYMLAGAAVPPELLQPIKKSLLHSPHYFLHHPLQHYQPAALLQSGYWGRGAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPTPTSANNCDGGSLGLGASSSSISSPPLASASLKSPFDLLRLNERSSGTKNEDEDHVGGDGRSGGGGGHMLRHFFDDWPRSLQDSDNVENNAAGPSLSISMPGNAAAASSDVSLKLSTGYGEDPGPRNENVGLVAEQLQLNWAGGWASSNQVASMGGPLAEALRSSISTSSPTSVLHHLPRGSGSETSIIST | 388 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma19g01816 | 388 | Pfam | WRC | 153 | 195 | IPR014977 | - | |
Gma19g01816 | 388 | PANTHER | GROWTH-REGULATING FACTOR 3 | 8 | 388 | - | - | |
Gma19g01816 | 388 | ProSiteProfiles | WRC domain profile. | 152 | 196 | IPR014977 | - | |
Gma19g01816 | 388 | Pfam | QLQ | 84 | 116 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Gma19g01816 | 388 | ProSiteProfiles | QLQ domain profile. | 83 | 118 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Gma19g01816 | 388 | PANTHER | - | 8 | 388 | IPR031137 | GO:0005634|GO:0006351|GO:0032502 | |
Gma19g01816 | 388 | MobiDBLite | consensus disorder prediction | 242 | 256 | - | - | |
Gma19g01816 | 388 | SMART | QLQ_2 | 82 | 118 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Gma19g01816 | 388 | MobiDBLite | consensus disorder prediction | 242 | 270 | - | - | |
Gma19g01816 | 388 | MobiDBLite | consensus disorder prediction | 1 | 63 | - | - | |
Gma19g01816 | 388 | MobiDBLite | consensus disorder prediction | 366 | 388 | - | - | |
Gma19g01816 | 388 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Gma19g01816 | 388 | MobiDBLite | consensus disorder prediction | 31 | 63 | - | - | |
Gma19g01816 | 388 | MobiDBLite | consensus disorder prediction | 194 | 226 | - | - | |
Gma19g01816 | 388 | MobiDBLite | consensus disorder prediction | 182 | 226 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma19g01816 | Gma-Chr19 | 47452135 | 47455112 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma19g01816 | 1 | 375 | GRF Transcription Factor Family | AT3G52910 | 48.628 | 7.86e-91 | 276 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GRF | Gma19g01816 | WRC | 2.4e-22 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma19g01816 | - | - | gmx:100814842 | 731.48 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma19g01816 | 19 | 47452135 | 47455112 | Gma19g01816 | 19 | 47452135 | 47455112 | ECH | |
Gma19g01816 | 19 | 47452135 | 47455112 | Gma03g01770 | 03 | 43802417 | 43805419 | GST | |
Gma19g01816 | 19 | 47452135 | 47455112 | Gma10g00620 | 10 | 6723157 | 6726188 | PCT | |
Gma19g01816 | 19 | 47452135 | 47455112 | Gma13g01311 | 13 | 27641471 | 27644196 | PCT | |
Gma10g00620 | 10 | 6723157 | 6726188 | Gma19g01816 | 19 | 47452135 | 47455112 | PCT | |
Gma13g01311 | 13 | 27641471 | 27644196 | Gma19g01816 | 19 | 47452135 | 47455112 | PCT |