Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01809 ATGGAAATGCCTGCCAGAAGATCCGGCAACTACACCCTCCTCAGTCAAACTCCTGACGACAACTTAACGGCGCCGTTGTTCGGTTGCTCCTCCGGCGACGGTCAAATCAACAGCAGCAAGTTCGAGAGAGTCTCCGATTGGGACTCCGGCGTCGAACACCGACAGGGGAATCGGATCGGGAATTTGCACTCCTCGTTCGGGATGCAGCGGCAGTCCAGCGAGGGCAGTTTCGGCGAGAGCTCTCTCTCCGGCGAGTTCTACGCGCCGACTCTGTCGGCTATCGCGGCGAATGAGATCGACGGATTCAGAGGCACGTTTGCGGGAAATTCGGCGGCGAGGAGCGGAGGTTCCTCCGGCAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTACCAATTACAGTTGGCACTGGCTCTTCGGCTTTCCTCGGAGGCCACGTGTGCTGATGATCCCAATTTTCTGGATCCCGTGCCCGACGAATCCGCGTTGAGGTCTTTGTCCTCGTTTTCCGCAGAGGCAGTGTCGCATAGGTTTTGGGTGAAGGGATGCCTATTATACTTCGACAAAATTCCTGATGGCTTTTATCTAATTCATGGGATGGATCCCTATGTATGGACTGTGTGCACCAATCTTCAGGAAAATGGCCGAATTCCTTCGCTTGAGACACTAAAATCTATAAATCCTTCTGATTCTTCACTTGAAGTAGTTTTTGTGGATAGACGTAATGATCCTAGCTTACGAGAACTGCAAAACAAAGTACAAGACATTTCTTGTTGCTGCATAGCAACAACTGATGTTGTAGACCAGCTTGCGAAGCTGGTTTGCAATTGTATGGGGGGCTCAGCTTCTGTATGGGAAGATGATCTTTTTCCTATATGGAGGGAGCGCATTAATGATCTAAGAGATTGCTTAGGATCTGTCGTTGTACCAATTGGAAGTCTATCTACTGGACTTTGCAGGCATCGTGCTGTATTATTCAAAGTAGTACTAGCTGACACCATTGATTTGCCATGCCGAATTGCTAAGGGCTGTAAATATTGTTCAAGAGATGATGCCTCCTCATGTCTTGTTCGATTTGGACTTGACAGGGAATACATGGTTGATCTTATTGGGAAGCCGGGTTGCTTATGCGAGCCTGATTCCTTGGTCAATGGTCCATCTTCCATTTCATTTTCTTCACCCTTGTGCTTTCCGAGACATAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAATATTTCTCGGATTGTATGTCTGCTGAGCTTGTCTTCGATAGTAGTTCTGCAGAACAGTATGAAAGGCAGTACAGGGACAGGAACCCTGGGTCAATTCCAAATGATAACAACAGAAGTTCTCTCGTTCCTCTGCATCCACAACCTTATCGTTCAAGTGCACATGATCGAGGCTATGAAACATTTAAATCAGGTAAGCCTCCTCAGAATGCTGTAGAGCCGACCATGACAAGCCGGGATTCATTGCCTTTAAAGCATAACCGTCCTGGTCATAGAGATACACAGACCCGACTACTGATTCCTAGCAAACCAACTAGAGAGTTTTCCCTTGATATGGAGGATTTGGACATATCGTGGACTGATCTTGTTTTGAAAGGGAGAATTGGATCAGGTTCTTTTGGAACTGTACATCACGCAGAGTGGAATGGCTCGGAGGTTGCTGTGAAAATTCTGATGGAACAAGACTTCAAAGGTGAACGCTTCAAGGAATTCCTGAGGGAGGTTGCAATAATGAAAGGCTTACGGCATCCAAACATTGTTTTACTTATGGGTGCAGTCACTAAGCCTCCTAATTTATCAATTGTCACGGAATATTTGTCAAGGGGTAGCTTGTACAGGCTGTTGCATAAACCTGGCGCTACAGAGATGTTGGATGAGAGACGTAGGCTTAGTATGGCTTATGATGTGGCTAAGGGAATGAATTATCTTCATAAACGCAATCCTCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTTGTTGACAAGAAATATACAGTGAAGGTTGGTGATTTTGGGCTTTCCCGACTAAAGGCAAATACATTTCTCTCATCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTTCGTGACGAGCCATCCAATGAGAAGTCAGATGTTTACAGCTTTGGTGTCATCTTGTGGGAGATCGCAACATTGCAACAGCCTTGGAGTAATTTGAATCCACCACAGGTTGTGGCAGCTGTTGGCTTTAAGGGAAAAAGACTTGAGATACCACGTGATTTAAATCCTCAATTAGCCTCTATAATTGAGTCTTGTTGGGCCAATGAACCCTGGAAACGCCCTTCTTTTTCAAGTATAATGGATTCTTTGAAAGAATACACTGTTTCAATAGTCCCAGAGGCACAGTTGTACATTTCTGTTCTAATTCGGACATTCTCGACCATGTCTTCTTCCCAGTTACCTTCCTCAAGTCCTGATTTTGAGACGGTAAATAGTTTGCCACGGCCACTTGAATGCTTGCAAGGGAACCCGGTTCGGGCACTTTTTTCCAAGACTTTCGACCTCGTCGACGATCCGTCGCTGGATCCGATCATATCCTGGGGCTCCTCCGGTGTTAGCTTCGTGGTGTGGGATCGTACCCTGTTTGCAAGACACGTCTTGCCAAGGAATTTCAAGCATAACAATTTCTCCAGTTTTGTTCGCCTGTTAAATACTTATGTATTCCGCAAGATTAACACAGATAAGTGGGAGTTTTTTAATGAAGCTTTCCAGCGAGGAAAGAGACATCTTCTGAAGAACATTCGAAGGTGCGGGCCACCTCAGTCCCATCAGGTTGGTAGCTATATTGTGCCTTATTCTGATGCAGGTAAGGCTGGGCTTGAATTTGAGATAGAAAGTCTAAGGAAGGACAGGAGTGTGTTGATGCAAGAGGTGCTTGAGTTGCAACAACAGCAGAGAACAACACTTCAATGTGCGAAACAGCATGAGAAGGAACAAAGAGATATAGGGTCTCCTAAGGTGAGAAGGAAGTTTGTCAAGCAGCACCAATGCCAAACAGGAATATCAGATTTTTTGAATGATGGGCATATTGCTTTGGCAAAAGAATTGAGTGAAGGCGCAGAGAATATGATATCAGATGAATTGGCCACAGTCCATGAGGGGGCAGGATTTCCAGAGCTTTCACCTCTTGAAACTGAAAGAATCATCAAGCAAGAGGATAAATGGAACACCAGCTTTAATGCTAGTGGCGCTCCTTCAAGGTTTGGGAATGAGCAGTGGGGAAATCCTACCAATTATGAAGTGCCAGAATTTGGAGTCACGAGTGttactacgttgccgtctacgaggttccgagcatatgacagagactccggcggcggcggagggtatcagccgcagcctccgccgcaccaagagcttgtgattcagtacaagaccgcgcttgctgagctcactttcaattcgaagccaataattaccaacttgactattattgctggagagaacttgtctgctgccaaggcaattgctgccaccgtttgtgctaatattatagaggttccgagtgatcaaaaactgccatctctttatctcttagacagtattgtgaagaacattggacgggattatataaaatattttgcttccagactacctgaggtattctgcaaggcttacagacaggttgatccttgtgttcattcaagtatgaaacatctttttggaacttggaaaggagtctttcctcctcagtcccttcagatgattgagaaggaacttggctttgcacctgcagtcaatagttcagcttcagtatctgctacagtcaggagtgatttgcagtcacaacgcccacctcatagtatccatgtgaatcccaagtatttagaaaggcagcgtcttcagcagtcaagtaggagtaaaggggtagttaatgatatgactggagctgttttaaactcaaatgaggattcggagaggccagatagagctttgagtgctgcacgaccatggctggatcctaggattaacatgcttaataatcagcacacacatagagatacacatggatggcagatgatgagaatttggaaggtgaagatcacctccaaatcacacgcccttttggagcaaagagaactcagtgatcaccaattcgGATAA 4161 0.3677 MEMPARRSGNYTLLSQTPDDNLTAPLFGCSSGDGQINSSKFERVSDWDSGVEHRQGNRIGNLHSSFGMQRQSSEGSFGESSLSGEFYAPTLSAIAANEIDGFRGTFAGNSAARSGGSSGKSWAQQTEESYQLQLALALRLSSEATCADDPNFLDPVPDESALRSLSSFSAEAVSHRFWVKGCLLYFDKIPDGFYLIHGMDPYVWTVCTNLQENGRIPSLETLKSINPSDSSLEVVFVDRRNDPSLRELQNKVQDISCCCIATTDVVDQLAKLVCNCMGGSASVWEDDLFPIWRERINDLRDCLGSVVVPIGSLSTGLCRHRAVLFKVVLADTIDLPCRIAKGCKYCSRDDASSCLVRFGLDREYMVDLIGKPGCLCEPDSLVNGPSSISFSSPLCFPRHKPAEPTIDFRSLAKQYFSDCMSAELVFDSSSAEQYERQYRDRNPGSIPNDNNRSSLVPLHPQPYRSSAHDRGYETFKSGKPPQNAVEPTMTSRDSLPLKHNRPGHRDTQTRLLIPSKPTREFSLDMEDLDISWTDLVLKGRIGSGSFGTVHHAEWNGSEVAVKILMEQDFKGERFKEFLREVAIMKGLRHPNIVLLMGAVTKPPNLSIVTEYLSRGSLYRLLHKPGATEMLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVGDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEIATLQQPWSNLNPPQVVAAVGFKGKRLEIPRDLNPQLASIIESCWANEPWKRPSFSSIMDSLKEYTVSIVPEAQLYISVLIRTFSTMSSSQLPSSSPDFETVNSLPRPLECLQGNPVRALFSKTFDLVDDPSLDPIISWGSSGVSFVVWDRTLFARHVLPRNFKHNNFSSFVRLLNTYVFRKINTDKWEFFNEAFQRGKRHLLKNIRRCGPPQSHQVGSYIVPYSDAGKAGLEFEIESLRKDRSVLMQEVLELQQQQRTTLQCAKQHEKEQRDIGSPKVRRKFVKQHQCQTGISDFLNDGHIALAKELSEGAENMISDELATVHEGAGFPELSPLETERIIKQEDKWNTSFNASGAPSRFGNEQWGNPTNYEVPEFGVTSVTTLPSTRFRAYDRDSGGGGGYQPQPPPHQELVIQYKTALAELTFNSKPIITNLTIIAGENLSAAKAIAATVCANIIEVPSDQKLPSLYLLDSIVKNIGRDYIKYFASRLPEVFCKAYRQVDPCVHSSMKHLFGTWKGVFPPQSLQMIEKELGFAPAVNSSASVSATVRSDLQSQRPPHSIHVNPKYLERQRLQQSSRSKGVVNDMTGAVLNSNEDSERPDRALSAARPWLDPRINMLNNQHTHRDTHGWQMMRIWKVKITSKSHALLEQRELSDHQFG 1386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01809 1386 Pfam Ethylene-responsive protein kinase Le-CTR1 170 376 - -
Gma19g01809 1386 SMART serkin_6 535 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01809 1386 Pfam CID domain 1145 1253 IPR006569 -
Gma19g01809 1386 MobiDBLite consensus disorder prediction 481 495 - -
Gma19g01809 1386 PRINTS Tyrosine kinase catalytic domain signature 760 782 IPR001245 GO:0004672|GO:0006468
Gma19g01809 1386 PRINTS Tyrosine kinase catalytic domain signature 609 622 IPR001245 GO:0004672|GO:0006468
Gma19g01809 1386 PRINTS Tyrosine kinase catalytic domain signature 716 738 IPR001245 GO:0004672|GO:0006468
Gma19g01809 1386 PRINTS Tyrosine kinase catalytic domain signature 650 668 IPR001245 GO:0004672|GO:0006468
Gma19g01809 1386 SMART hsfneu3 843 936 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma19g01809 1386 MobiDBLite consensus disorder prediction 443 460 - -
Gma19g01809 1386 MobiDBLite consensus disorder prediction 434 508 - -
Gma19g01809 1386 CDD STKc_MAP3K-like 541 789 - -
Gma19g01809 1386 ProSitePatterns Protein kinases ATP-binding region signature. 541 562 IPR017441 GO:0005524
Gma19g01809 1386 ProSiteProfiles Protein kinase domain profile. 535 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma19g01809 1386 CDD CID_Pcf11 1140 1252 - -
Gma19g01809 1386 Gene3D Transferase(Phosphotransferase) domain 1 614 799 - -
Gma19g01809 1386 Pfam HSF-type DNA-binding 849 935 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma19g01809 1386 SMART 558neu5 1138 1260 IPR006569 -
Gma19g01809 1386 Gene3D Phosphorylase Kinase; domain 1 528 613 - -
Gma19g01809 1386 SUPERFAMILY Protein kinase-like (PK-like) 512 788 IPR011009 -
Gma19g01809 1386 Coils Coil 963 983 - -
Gma19g01809 1386 PRINTS Heat shock factor (HSF) domain signature 885 897 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma19g01809 1386 PRINTS Heat shock factor (HSF) domain signature 847 870 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma19g01809 1386 PRINTS Heat shock factor (HSF) domain signature 898 910 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gma19g01809 1386 Gene3D - 840 936 IPR036388 -
Gma19g01809 1386 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 110 795 - -
Gma19g01809 1386 MobiDBLite consensus disorder prediction 56 79 - -
Gma19g01809 1386 Gene3D - 1132 1260 IPR008942 -
Gma19g01809 1386 Pfam Protein tyrosine and serine/threonine kinase 536 789 IPR001245 GO:0004672|GO:0006468
Gma19g01809 1386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Gma19g01809 1386 SUPERFAMILY "Winged helix" DNA-binding domain 847 935 IPR036390 -
Gma19g01809 1386 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 110 795 - -
Gma19g01809 1386 SUPERFAMILY ENTH/VHS domain 1135 1263 IPR008942 -
Gma19g01809 1386 ProSiteProfiles CID domain profile. 1135 1263 IPR006569 -
Gma19g01809 1386 MobiDBLite consensus disorder prediction 58 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01809 Gma-Chr19 47292486 47332586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01809 1 798 MAP Kinase Kinase Kinase AT5G03730 64.387 0.0 946
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gma19g01809 PK_Tyr_Ser-Thr 1.2e-69 CL0016
TF HSF Gma19g01809 PK_Tyr_Ser-Thr 1.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01809 K14510 - gmx:100810555 1575.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01809 19 47292486 47332586 Gma19g01809 19 47292486 47332586 ECH
Gma19g01809 19 47292486 47332586 Gma03g01760 03 43676919 43685831 GST