Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01807 ATGGAGTTTTGGGGTGTTGAGGTGAAAAATGGAGAATCTCTCAAGGTTGATCCAGGAGATGACAAGATTATCCACCTTTCAAATGCATGCATGGGGGATGTCACTAAGGATATAGGAGGTGGACCAGTAGCCCTGTATGTGAAGTTTGGTAACCAGAAGTTTGTACTTGGAACACTTTCTTCTGATAAATTTCCTCAGATATCTTATGATTTGGTATTTGAGAAGGAATTTGAGCTATCCCATAACTGGAAATATGGAAGTGTCTTCTTTACTGGATTTAAAGCTCAACCTCAGTCGGAGTCTGATGAtgatgaagattctgatgATATTGATGAAGATATTCCAGTTAGTGCAGTCAATGGTAAACCCGAGGTTGGCGTCAAACCTGATGCAAATGAAGCTAAACAGAAGAAGATAGCAGATCCAAGAAAGAGGGATGCAAATGGTGAAGATGACGATTCATCCGAATCTGATTCTGATGATGATTCAAGTGAAGATAAGCCCACAGCGAATGGCGACATAGAAAGTAGTGAAGGTGATGATGATAGCGATGATGATGAGGAGGAGGAGGGGGATGATGAATCTGATGAGGAGACAGCCAAGAAGATTGAAGCAAGCAATAAGAGGGGTATTGAGTCTTCTAAGAAAACACCTGTTCCTGTGAAGAAGACAAAGTTTGTTACTCCTCAAAAGACTGATAGCAAGAATGTTGTCCATGCTGCAACTCCTCACCCTTCTAAGCAGGCTGGTAAAGCAACTGCAAATAACAAGCTGCAGTCTCCGAAGTCAGGTGGAGATTACAGCTGCAAGCCTTGCAACAGGTTATTTAAGACAGAAGATGCCTTAAGTTCTCATAACAAGGCCAAGCACAGTGCTAAGTGA 882 0.4138 MEFWGVEVKNGESLKVDPGDDKIIHLSNACMGDVTKDIGGGPVALYVKFGNQKFVLGTLSSDKFPQISYDLVFEKEFELSHNWKYGSVFFTGFKAQPQSESDDDEDSDDIDEDIPVSAVNGKPEVGVKPDANEAKQKKIADPRKRDANGEDDDSSESDSDDDSSEDKPTANGDIESSEGDDDSDDDEEEEGDDESDEETAKKIEASNKRGIESSKKTPVPVKKTKFVTPQKTDSKNVVHAATPHPSKQAGKATANNKLQSPKSGGDYSCKPCNRLFKTEDALSSHNKAKHSAK 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01807 293 ProSitePatterns Zinc finger C2H2 type domain signature. 269 290 IPR013087 -
Gma19g01807 293 Pfam Nucleoplasmin-like domain 3 92 IPR041232 -
Gma19g01807 293 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 289 - -
Gma19g01807 293 MobiDBLite consensus disorder prediction 175 197 - -
Gma19g01807 293 MobiDBLite consensus disorder prediction 198 219 - -
Gma19g01807 293 MobiDBLite consensus disorder prediction 248 263 - -
Gma19g01807 293 MobiDBLite consensus disorder prediction 128 151 - -
Gma19g01807 293 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 289 - -
Gma19g01807 293 MobiDBLite consensus disorder prediction 96 269 - -
Gma19g01807 293 Gene3D Nucleoplasmin core domain 1 100 - -
Gma19g01807 293 ProSiteProfiles Zinc finger C2H2 type domain profile. 267 293 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01807 Gma-Chr19 47265176 47269674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01807 1 292 C2H2 Transcription Factor Family AT5G03740 43.421 1.09e-59 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01807 - - gmx:100784374 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01807 19 47265176 47269674 Gma19g01807 19 47265176 47269674 ECH
Gma19g01807 19 47265176 47269674 Gma03g01755 03 43609577 43615285 GST