Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01795 ATGGAACCCAATGCACTAGGTGGTGGAATATTTCCTAACATAAGTAGTGGTTTGCTAGGAGTAGAAAACCCTTTACAGCCGCAACAACAACAACAACAACAACCAAACCTTCAAAACCAGCGAAACCCTCACCCTTTGCACCATCCCCAAATGGTTTCCTACGCCACTCACCATGACACTGACACACATCATCAACAACAACCTCCTCAGCAACCAATCAAACATGGCTACAACTTTTCAGCCATCAAATCCAACAAGTCACAAAGCACACTCAGTGACGAAGATGAACCAGTGTTCACAGCAGAAGACAACTGCTCCGGGGACCCCAAGAGAAAAGTGTCACCGTGGCATAGAATGAAGTGGACTGACACCATGGTTAAGCTCCTAATAATGGCGGTTTATTACATTGGAGACGAGGCTGGTTCAGAATGCACTGATCCAACCAAGAAGAAAGCCTCTGGGCTGCTTCAAAAGAAAGGGAAATGGAAATCAGTGTCGAAGGGCATGATGGAGAAGGGTTACTATGTGTCTCCTCAGCAATGTGAAGACAAGTTCAATGACTTGAACAAGAGGTACAAGAGGGTCAACGACATTCTAGGTAAGGGCACAGCATGTCGGGTGGTGGAGAACCAAACCTTGTTGGACACTATGGATCTGTCGCCAAAGATGAAGGAAGAAGTTCGAAAGCTCCTCAACTCAAAGCACTTGTTCTTCAGGGAAATGTGTGCTTACCACAACAGTTGTGGCCACAACAACAACTGTGGCAGTACTTCCAACGTGCAACAATCAACCGAGGCTCAACCACCACATCAACATCAACAGCAGCAGTGTTTGCACTCATCAGAGAACGGGGTGGGGAGTCTGAGAATGTTGAAAGAGGATGAGGATGAGGACGATGATTCGGAGGAGTTTTCTGATGAGGATGAAGCGGAATCAGGAGAAGGAGGATCAAGGGGTATGGAGGAGGATGAAAATGATGTGATGAGGAGGAGAGCAAGGAATAAGGGAGGGTTTGGTGTTTCATCATCACAGATGATGCAGCAATTGAGTGGTGAAGTGAGTGGTGTGTTGCAAGACGGAGGGAAGAGTGCTTGGGAGAAAAAACAGTGGATGAAGAAGAGGGTTGTGCAGTTGGAGGAGCAGCAGGTGAGTTATCAAATGCAGGCGTTTGAGTTGGAAAAGCAGCGGTTGAAGTGGGCCAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGAAAGACAAGCTTCAAAATGAAAGGAGGAGGTTGGAAATAGAGAGAATGGTCTTGCTACTTCGCCATAAGGAGCTTGAATTGGTCAATGTTCAGCAGCAGCAGCATCAACAACAACATTCTTCTACCTAG 1362 0.4677 MEPNALGGGIFPNISSGLLGVENPLQPQQQQQQQPNLQNQRNPHPLHHPQMVSYATHHDTDTHHQQQPPQQPIKHGYNFSAIKSNKSQSTLSDEDEPVFTAEDNCSGDPKRKVSPWHRMKWTDTMVKLLIMAVYYIGDEAGSECTDPTKKKASGLLQKKGKWKSVSKGMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQTLLDTMDLSPKMKEEVRKLLNSKHLFFREMCAYHNSCGHNNNCGSTSNVQQSTEAQPPHQHQQQQCLHSSENGVGSLRMLKEDEDEDDDSEEFSDEDEAESGEGGSRGMEEDENDVMRRRARNKGGFGVSSSQMMQQLSGEVSGVLQDGGKSAWEKKQWMKKRVVQLEEQQVSYQMQAFELEKQRLKWARFSSKKEREMEKDKLQNERRRLEIERMVLLLRHKELELVNVQQQQHQQQHSST 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01795 453 Coils Coil 375 395 - -
Gma19g01795 453 MobiDBLite consensus disorder prediction 293 310 - -
Gma19g01795 453 MobiDBLite consensus disorder prediction 293 326 - -
Gma19g01795 453 MobiDBLite consensus disorder prediction 311 326 - -
Gma19g01795 453 PANTHER F16F4.11 PROTEIN-RELATED 1 453 - -
Gma19g01795 453 Pfam Myb/SANT-like DNA-binding domain 118 243 IPR044822 -
Gma19g01795 453 Gene3D - 121 194 - -
Gma19g01795 453 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 453 - -
Gma19g01795 453 MobiDBLite consensus disorder prediction 86 106 - -
Gma19g01795 453 MobiDBLite consensus disorder prediction 259 279 - -
Gma19g01795 453 Coils Coil 405 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01795 Gma-Chr19 47180735 47182637 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma19g01795 Myb_DNA-bind_4 9.6e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01795 - - gmx:547619 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01795 19 47180735 47182637 Gma19g01795 19 47180735 47182637 ECH
Gma19g01795 19 47180735 47182637 Gma03g01743 03 43521915 43523282 GST
Gma19g01795 19 47180735 47182637 Gma10g00596 10 6284317 6285882 PCT
Gma19g01795 19 47180735 47182637 Gma13g01286 13 27260612 27262434 PCT
Gma10g00596 10 6284317 6285882 Gma19g01795 19 47180735 47182637 PCT
Gma13g01286 13 27260612 27262434 Gma19g01795 19 47180735 47182637 PCT