Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma19g01792 ATGGTTCTCAAAACTGAACTATGCCGATTCAGTGGTGCCAAGATCTACCCAGGAAAGGGCATCAGATTTGTTCGTGGTGATTCTCAGgttttcctgtttgcaaactcaaaatgtaagaggtatttccacaatcgcctgaagccttcaaagctcacctggactgcaatgtacagaaagcaacacaaaaaggacattgctcaagaagctgtgaggaagaggagacgtgctgccaaaaagccttactctaggtccattgttggtgcgaccttggaagtaatccagaaaaagagagctgagaagccagaagttcgagatgcagctagggaagctgctcttcgtgaaattaaggagaggatcaagaaaacaaaggatgagaagaaggctaagaaagcagaAGTTGCTTCCAAGTCGCAAAAAGCAGGAGGGAAAGGCAATGTTTCTAAGGGTGTGATGCCCAAAGGTCCCAAACTTGGCGGTGGAGGCGGGAAACGTTGA 495 0.1859 MVLKTELCRFSGAKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVRKRRRAAKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVASKSQKAGGKGNVSKGVMPKGPKLGGGGGKR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma19g01792 164 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Gma19g01792 164 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Gma19g01792 164 SMART 4TRASH 8 46 IPR011017 -
Gma19g01792 164 MobiDBLite consensus disorder prediction 118 164 - -
Gma19g01792 164 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Gma19g01792 164 Coils Coil 112 139 - -
Gma19g01792 164 MobiDBLite consensus disorder prediction 118 136 - -
Gma19g01792 164 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Gma19g01792 164 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 IPR000988 -
Gma19g01792 164 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 - -
Gma19g01792 164 Gene3D - 69 138 - -
Gma19g01792 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma19g01792 Gma-Chr19 47157476 47159521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma19g01792 1 157 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 84.076 2.72e-86 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma19g01792 K02896 - gmx:100499720 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01792 19 47157476 47159521 Gma19g01792 19 47157476 47159521 ECH
Gma19g01792 19 47157476 47159521 Gma03g01740 03 43493695 43498687 GST
Gma19g01792 19 47157476 47159521 Gma10g00613 10 6544921 6547027 PCT
Gma10g00613 10 6544921 6547027 Gma19g01792 19 47157476 47159521 PCT